biolflor_lookup: biolflor_lookup

In TR8: A Tool for Downloading Functional Traits Data for Plant Species

Description

This dataframe is used to retrieve species URLs from the BiolFlor website (http://www.ufz.de/biolflor/index.jsp).

Usage

biolflor_lookup

Format

A data frame with 3688 observations on the following 8 variables.

submittedname

a character vector containing the original species' names as used in BiolFlor

acceptedname

a character vector containing the acceptedanme according to the tnrs function

sourceid

a character vector; all the names are checked against the iPlant\_TNRS database

score

a character vector expressing the score for matching submitted and accepted names

matchedname

name matched by the tnrs function

authority

a character vector

V1

a character vector

V2

url of the BiolFlor web page for the species of interest

References

Please use the follow citation ay time you use data derived from Biolflor: BIOLFLOR - Eine Datenbank zu biologisch-ökologischen Merkmalen zur Flora von Deutschland. Schriftenreihe für Vegetationskunde 38: 1-333. (Bundesamt für. Bonn, Bundesamt für Naturschutz)

Examples

head(biolflor_lookup)

Example output

        	Please remember to always cite the appropriate sources of traits data (see ?bib).
        
Warning message:
no DISPLAY variable so Tk is not available 
         submittedname         acceptedname    sourceid score
1           Abies alba           Abies alba iPlant_TNRS     1
2 Abutilon theophrasti Abutilon theophrasti iPlant_TNRS     1
3       Acer campestre       Acer campestre iPlant_TNRS     1
4  Acer monspessulanum  Acer monspessulanum iPlant_TNRS     1
5         Acer negundo         Acer negundo iPlant_TNRS     1
6          Acer opalus          Acer opalus iPlant_TNRS     1
           matchedname authority                          V1
1           Abies alba     Mill.            Abies alba Mill.
2 Abutilon theophrasti    Medik. Abutilon theophrasti Medik.
3       Acer campestre        L.           Acer campestre L.
4  Acer monspessulanum        L.      Acer monspessulanum L.
5         Acer negundo        L.             Acer negundo L.
6          Acer opalus     Mill.           Acer opalus Mill.
                                                                                         V2
1 /biolflor/taxonomie/taxonomie.jsp?action=filter&ID_Familie=-1&ID_Gattung=0&ID_Taxonomie=0
2 /biolflor/taxonomie/taxonomie.jsp?action=filter&ID_Familie=-1&ID_Gattung=1&ID_Taxonomie=1
3 /biolflor/taxonomie/taxonomie.jsp?action=filter&ID_Familie=-1&ID_Gattung=2&ID_Taxonomie=2
4 /biolflor/taxonomie/taxonomie.jsp?action=filter&ID_Familie=-1&ID_Gattung=2&ID_Taxonomie=3
5 /biolflor/taxonomie/taxonomie.jsp?action=filter&ID_Familie=-1&ID_Gattung=2&ID_Taxonomie=4
6 /biolflor/taxonomie/taxonomie.jsp?action=filter&ID_Familie=-1&ID_Gattung=2&ID_Taxonomie=5

TR8 documentation built on Dec. 2, 2020, 1:06 a.m.