TaxaNorm_Run_Diagnose: Function to run TaxNorm algorithm

In TaxaNorm: Feature-Wise Normalization for Microbiome Sequencing Data

Function to run TaxNorm algorithm

Description

Function to run TaxNorm algorithm

Usage

TaxaNorm_Run_Diagnose(Normalized_Results, prev = TRUE, equiv = TRUE, group)

Arguments

Normalized_Results	(Required) Input results from from run_norm()
prev	run prev test
equiv	run equiv test
group	group used for taxanorm normalization

Value

a list containing the normalized count values

Examples

data("TaxaNorm_Example_Input", package = "TaxaNorm")
data("TaxaNorm_Example_Output", package = "TaxaNorm")
Diagnose_Data <- TaxaNorm_Run_Diagnose(Normalized_Results = TaxaNorm_Example_Output,
                                        prev = TRUE,
                                        equiv = TRUE,
                                        group = sample_data(TaxaNorm_Example_Input)$body_site)

TaxaNorm documentation built on June 24, 2024, 5:15 p.m.