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R/constants.r
In TrustVDJ: Tools for Immune Repertoire Analysis
## constants ##
# chain name for TRUST4 barcode report
chainName = c('v_call', 'd_call', 'j_call', 'c_call',
'cdr3', 'cdr3_aa', 'consensus_count', 'sequence_id',
'cdr3_germline_similarity', 'complete_vdj')
# consensus name for 10x clonotype report
consensusName = c('clonotype_id', 'consensus_id', 'clonotype_frequency', 'clonotype_proportion',
'cdr3', 'cdr3_aa', 'clonotype_inkt_evidence', 'clonotypemait_evidence')
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TrustVDJ documentation built on March 18, 2022, 5:53 p.m.
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## constants ##
# chain name for TRUST4 barcode report
chainName = c('v_call', 'd_call', 'j_call', 'c_call',
'cdr3', 'cdr3_aa', 'consensus_count', 'sequence_id',
'cdr3_germline_similarity', 'complete_vdj')
# consensus name for 10x clonotype report
consensusName = c('clonotype_id', 'consensus_id', 'clonotype_frequency', 'clonotype_proportion',
'cdr3', 'cdr3_aa', 'clonotype_inkt_evidence', 'clonotypemait_evidence')
Try the TrustVDJ package in your browser
Any scripts or data that you put into this service are public.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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