Nothing
# library(dplyr)
# library(shinydashboard)
# library(shiny)
# library(DT)
##' @title Xena Shiny App
##' @export
XenaShiny <- function() { # nocov start
if (!requireNamespace("shiny", quietly = TRUE)) {
stop("Package 'shiny' is required!")
}
if (!requireNamespace("shinydashboard", quietly = TRUE)) {
stop("Package 'shinydashboard' is required!")
}
if (!requireNamespace("DT", quietly = TRUE)) {
stop("Package 'DT' is required!")
}
data <- showTCGA()
projects <- unique(data$ProjectID)
datatypes <- unique(data$DataType)
filetypes <- unique(data$FileType)
ui <- shinydashboard::dashboardPage(
shinydashboard::dashboardHeader(title = "UCSCXenaTools"),
shinydashboard::dashboardSidebar(shinydashboard::sidebarMenu(
shinydashboard::menuItem(
"TCGA DataTable",
tabName = "tcga_datatable",
icon = shiny::icon("list")
)
)),
shinydashboard::dashboardBody(shinydashboard::tabItems(
shinydashboard::tabItem(
tabName = "tcga_datatable",
shiny::fluidRow(
shiny::column(
2,
shiny::selectInput(
"projectid",
"ProjectID:",
c("All", projects),
selected = "All",
multiple = TRUE
)
),
shiny::column(
3,
shiny::selectInput(
"datatype",
"DataType:",
c("All", datatypes),
selected = "All",
multiple = TRUE
)
),
shiny::column(
4,
shiny::selectInput(
"filetype",
"FileType:",
c("All", filetypes),
selected = "All",
multiple = TRUE
)
)
),
# Create the table.
shiny::fluidRow(DT::dataTableOutput("tcga_table"))
)
))
)
server <- function(input, output, session) {
shiny::updateSelectInput(session,
"datatype",
"DataType:",
c("All", unique(data$DataType)),
selected = "All"
)
shiny::updateSelectInput(session,
"filetype",
"FileType:",
c("All", unique(data$FileType)),
selected = "All"
)
# Filter data based on selections
output$tcga_table <- DT::renderDataTable(DT::datatable({
if (!"All" %in% input$projectid) {
data <- data[data$ProjectID %in% input$projectid, ]
}
if (!"All" %in% input$datatype) {
data <- data[data$DataType %in% input$datatype, ]
}
if (!"All" %in% input$filetype) {
data <- data[data$FileType %in% input$filetype, ]
}
data
}))
}
# run Shiny
shiny::runApp(shiny::shinyApp(ui, server))
} # nocov end
Any scripts or data that you put into this service are public.
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.