VLMC: Variable Length Markov Chains ('VLMC') Models

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Functions, Classes & Methods for estimation, prediction, and simulation (bootstrap) of Variable Length Markov Chain ('VLMC') Models.

Author
Martin Maechler <maechler@stat.math.ethz.ch>
Date of publication
2015-04-17 10:41:27
Maintainer
Martin Maechler <maechler@stat.math.ethz.ch>
License
GPL (>= 2)
Version
1.4-1

View on CRAN

Man pages

alpha2int
'Single Character' <-> Integer Conversion for Discrete Data
alphabet
The Alphabet in Use
as.dendrogram.vlmc
Dendrogram Construction from VLMCs
bnrf1
BNRF1 Gene DNA sequences: Epstein-Barr and Herpes
deviance.vlmc
Compute the Deviance of a Fitted VLMC Object
draw.vlmc
Draw a "VLMC" Object (in ASCII) as tree.
id2ctxt
VLMC Context ID Conversion
int2char
Character - Integer Conversion
logLik
Log Likelihood of and between VLMC objects
OZrain
Daily Rainfall in Melbourne, Australia, 1981-1990
predict.vlmc
Prediction of VLMC for (new) Series
prt.vvec
Recursively Print the VLMC Result Vector
RCplot
Residuals vs Context plot
residuals.vlmc
Compute Residuals of a Fitted VLMC Object
simulate.vlmc
Simulate a Discrete Time Series from fitted VLMC model
summary.vlmc
Summary of Fitted Variable Length Markov Chain (VLMC)
vlmc
Fit a Variable Length Markov Chain (VLMC)
vlmctree
Compute the tree structure of a "vlmc" object
vlmc.version
Version of VLMC Package

Files in this package

VLMC
VLMC/TODO
VLMC/inst
VLMC/inst/xdata
VLMC/inst/xdata/bnrf1_both.rda
VLMC/tests
VLMC/tests/pred-vlmc.Rout.save
VLMC/tests/AIC-etc.R
VLMC/tests/iid-cutoff.Rout.save
VLMC/tests/iid-cutoff.R
VLMC/tests/pred-vlmc.R
VLMC/tests/AIC-etc.Rout.save
VLMC/src
VLMC/src/io.c
VLMC/src/util.c
VLMC/src/predict.c
VLMC/src/vlmc.h
VLMC/src/prune.c
VLMC/src/gen.c
VLMC/src/vlmc_gen.h
VLMC/src/entropy.c
VLMC/src/sim.c
VLMC/src/fitvlmc.c
VLMC/src/init_alpha.c
VLMC/src/subutil.h
VLMC/src/alphabet.h
VLMC/src/vlmc_data.h
VLMC/src/data.c
VLMC/src/cutoffs.c
VLMC/src/saveload.c
VLMC/src/alpha_init.h
VLMC/src/drawvlmc.c
VLMC/src/predict.h
VLMC/src/vlmc_io.h
VLMC/NAMESPACE
VLMC/data
VLMC/data/OZrain.rda
VLMC/data/bnrf1.R
VLMC/R
VLMC/R/entropy.R
VLMC/R/draw.R
VLMC/R/predict.R
VLMC/R/rcplot.R
VLMC/R/alphabet.R
VLMC/R/vlmc.R
VLMC/R/conversion.R
VLMC/R/dendrogram.R
VLMC/R/sim.R
VLMC/R/zzz.R
VLMC/MD5
VLMC/README
VLMC/DESCRIPTION
VLMC/ChangeLog
VLMC/man
VLMC/man/residuals.vlmc.Rd
VLMC/man/simulate.vlmc.Rd
VLMC/man/bnrf1.Rd
VLMC/man/logLik.Rd
VLMC/man/draw.vlmc.Rd
VLMC/man/summary.vlmc.Rd
VLMC/man/deviance.vlmc.Rd
VLMC/man/predict.vlmc.Rd
VLMC/man/id2ctxt.Rd
VLMC/man/vlmc.version.Rd
VLMC/man/as.dendrogram.vlmc.Rd
VLMC/man/OZrain.Rd
VLMC/man/alpha2int.Rd
VLMC/man/alphabet.Rd
VLMC/man/int2char.Rd
VLMC/man/RCplot.Rd
VLMC/man/prt.vvec.Rd
VLMC/man/vlmc.Rd
VLMC/man/vlmctree.Rd