View source: R/whitestripe_ind.R
whitestripe_ind_to_mask | R Documentation |
Uses WhiteStripe indices to create image mask
whitestripe_ind_to_mask(img, indices, writeimg = FALSE, ...)
img |
Array or class nifti that is corresponds to dimensions of the images the indices were generated from |
indices |
indices from |
writeimg |
logical to write image or not |
... |
arguments to passed to |
Class of array or nifti depending on img
input
whitestripe, whitestripe_hybrid
## Not run: lib.loc = tempdir() if (download_img_data(lib.loc = lib.loc)){ t1 = readNIfTI(system.file("T1Strip.nii.gz", package="WhiteStripe", lib.loc = lib.loc)) t2 = readNIfTI(system.file("T2Strip.nii.gz", package="WhiteStripe", lib.loc = lib.loc)) ind = whitestripe_hybrid(t1, t2) mask = whitestripe_ind_to_mask(t1, ind$whitestripe.ind) orthographic(mask) } ## End(Not run)
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