Description Usage Format Details
The diversity functions offered in abdiv are organized based on the
function signature.
1 2 3 4 5 6 7 |
Four objects of class character.
The following character vectors are provided:
alpha_diversitiesAll non-phylogenetic alpha diversity measures. These functions take a single numeric vector as an argument.
beta_diversitiesAll non-phylogenetic beta diversity measures. These functions take two numeric vectors as arguments.
phylogenetic_alpha_diversitiesThere is only one phylogenetic alpha diversity measure implemented, but we use the plural to be consistent with the other vectors. This function takes a numeric vector, a phylogenetic tree object, and optionally a character vector of species labels.
phylogenetic_beta_diversitiesPhylogenetic measures of beta diversity. These functions take two numeric vectors, a phylogenetic tree object, and optionally a character vector of species labels.
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