Description Usage Format Details
The diversity functions offered in abdiv
are organized based on the
function signature.
1 2 3 4 5 6 7 |
Four objects of class character
.
The following character vectors are provided:
alpha_diversities
All non-phylogenetic alpha diversity measures. These functions take a single numeric vector as an argument.
beta_diversities
All non-phylogenetic beta diversity measures. These functions take two numeric vectors as arguments.
phylogenetic_alpha_diversities
There is only one phylogenetic alpha diversity measure implemented, but we use the plural to be consistent with the other vectors. This function takes a numeric vector, a phylogenetic tree object, and optionally a character vector of species labels.
phylogenetic_beta_diversities
Phylogenetic measures of beta diversity. These functions take two numeric vectors, a phylogenetic tree object, and optionally a character vector of species labels.
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