Description Usage Arguments Details Value
Match vector of counts to phylogenetic tree
1 | match_to_tree(x, tree, x_labels = NULL)
|
x |
A vector of species counts. |
tree |
A phylogenetic tree of class |
x_labels |
A vector of species labels for |
This function applies a couple of different methods to arrange the
data in x to match a phylogenetic tree.
If x_labels is provided, we use this vector to match the
elements of x with the tip labels in the tree.
If x_labels is not provided and x is a named vector,
we use the names to match the tip labels in the tree.
If x_labels is not provided and x is not named, we
assume that x is already in the correct order, check that the
length of x matches the number of tips in the tree, and return
x.
The vector x, re-arranged to match the tree.
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