Description Usage Arguments Value Examples
Combined plot of estimated activity curve from mixture model and separate mixture components
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model |
Model output from |
rug |
Logical argument for whether to plot a rug of the raw values. Plotting the rug for the separate components requires that saveclustIDs=TRUE when running GCMM. default=FALSE |
ruglwd |
Line width for rug plot |
ltyc |
Line type for activity curves for components |
ltym |
Line type for activity curves for mixture |
lwdc |
Line width for activity curve lines for components |
lwdm |
Line width for activity curve lines from mixture |
colc |
Character vector for colours for the activity curve lines and rug plot for components; must be of equal length to the number of components |
colm |
Character vector for colour of activity curve line from mixture model |
scale |
Scale for the plot, either "pi" (-pi, pi) or "2pi" (0, 2pi); default is that recommended by the GCMM function |
ymax |
Value for upper limit of y-axis |
axisunits |
Scale to use for the xaxis, either "radians", "time", "solar", "sun", or "none"; default="radians" |
xlines |
Whether to include lines on the graph for the x axis labels; default=TRUE |
Prints combined plot of estimated activity curve from mixture model and separate mixture components
1 2 3 4 5 | FoxActivityGCMM<-GCMM(data=redfoxsample$Radians,
RE1=redfoxsample$SamplingPeriod, family="vonmises", autorun=FALSE,
adapt=0, sample=300, burnin=300, thin=1,n.chains=2)
comboplot(FoxActivityGCMM)
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