Man pages for admiral
ADaM in R Asset Library

admiral_adlbLab Analysis Dataset
admiral_adslSubject Level Analysis Dataset
admiral-packageadmiral: ADaM in R Asset Library
assert_parameters_argumentAsserts 'parameters' Argument and Converts to List of...
atoxgr_criteria_ctcv4Metadata Holding Grading Criteria for NCI-CTCAEv4
atoxgr_criteria_ctcv5Metadata Holding Grading Criteria for NCI-CTCAEv5
atoxgr_criteria_daidsMetadata Holding Grading Criteria for DAIDs
basket_selectCreate a 'basket_select' object
call_derivationCall a Single Derivation Multiple Times
call_user_funCalls a Function Provided by the User
censor_sourceCreate a 'censor_source' Object
chr2varsTurn a Character Vector into a List of Expressions
compute_age_yearsCompute Age in Years
compute_bmiCompute Body Mass Index (BMI)
compute_bsaCompute Body Surface Area (BSA)
compute_dtfDerive the Date Imputation Flag
compute_durationCompute Duration
compute_egfrCompute Estimated Glomerular Filtration Rate (eGFR) for...
compute_framinghamCompute Framingham Heart Study Cardiovascular Disease 10-Year...
compute_mapCompute Mean Arterial Pressure (MAP)
compute_qtcCompute Corrected QT
compute_qual_imputationFunction to Impute Values When Qualifier Exists in Character...
compute_qual_imputation_decCompute Factor for Value Imputations When Character Value...
compute_rrCompute RR Interval From Heart Rate
compute_scaleCompute Scale Parameters
compute_tmfDerive the Time Imputation Flag
consolidate_metadataConsolidate Multiple Meta Datasets Into a Single One
convert_blanks_to_naConvert Blank Strings Into NAs
convert_date_to_dtmConvert a Date into a Datetime Object
convert_dtc_to_dtConvert a Date Character Vector into a Date Object
convert_dtc_to_dtmConvert a Date Character Vector into a Datetime Object
convert_na_to_blanksConvert NAs Into Blank Strings
country_code_lookupCountry Code Lookup
count_valsCount Number of Observations Where a Variable Equals a Value
create_period_datasetCreate a Reference Dataset for Subperiods, Periods, or Phases
create_query_dataCreates a queries dataset as input dataset to the...
create_single_dose_datasetCreate dataset of single doses
date_sourceCreate a 'date_source' object
default_qtc_paramcdGet Default Parameter Code for Corrected QT
derivation_sliceCreate a 'derivation_slice' Object
derive_basetype_recordsDerive Basetype Variable
derive_expected_recordsDerive Expected Records
derive_extreme_eventAdd the Worst or Best Observation for Each By Group as New...
derive_extreme_recordsAdd the First or Last Observation for Each By Group as New...
derive_locf_recordsDerive LOCF (Last Observation Carried Forward) Records
derive_param_bmiAdds a Parameter for BMI
derive_param_bsaAdds a Parameter for BSA (Body Surface Area) Using the...
derive_param_computedAdds a Parameter Computed from the Analysis Value of Other...
derive_param_doseintAdds a Parameter for Dose Intensity
derive_param_exist_flagAdd an Existence Flag Parameter
derive_param_exposureAdd an Aggregated Parameter and Derive the Associated Start...
derive_param_extreme_recordAdds a Parameter Based on First or Last Record from Multiple...
derive_param_framinghamAdds a Parameter for Framingham Heart Study Cardiovascular...
derive_param_mapAdds a Parameter for Mean Arterial Pressure
derive_param_qtcAdds a Parameter for Corrected QT (an ECG measurement)
derive_param_rrAdds a Parameter for Derived RR (an ECG measurement)
derive_param_tteDerive a Time-to-Event Parameter
derive_param_wbc_absAdd a parameter for lab differentials converted to absolute...
derive_summary_recordsAdd New Records Within By Groups Using Aggregation Functions
derive_var_age_yearsDerive Age in Years
derive_var_analysis_ratioDerive Ratio Variable
derive_var_anrindDerive Reference Range Indicator
derive_var_atoxgrDerive Lab High toxicity Grade 0 - 4 and Low Toxicity Grades...
derive_var_atoxgr_dirDerive Lab Toxicity Grade 0 - 4
derive_var_baseDerive Baseline Variables
derive_var_chgDerive Change from Baseline
derive_var_dthcausDerive Death Cause
derive_var_extreme_dtDerive First or Last Date from Multiple Sources
derive_var_extreme_dtmDerive First or Last Datetime from Multiple Sources
derive_var_extreme_flagAdd a Variable Flagging the First or Last Observation Within...
derive_var_joined_exist_flagDerives a Flag Based on an Existing Flag
derive_var_merged_ef_msrcMerge an Existence Flag From Multiple Sources
derive_var_merged_exist_flagMerge an Existence Flag
derive_var_merged_summaryMerge Summary Variables
derive_var_obs_numberAdds a Variable Numbering the Observations Within Each By...
derive_var_ontrtflDerive On-Treatment Flag Variable
derive_var_pchgDerive Percent Change from Baseline
derive_var_relative_flagFlag Observations Before or After a Condition is Fulfilled
derive_vars_aageDerive Analysis Age
derive_vars_atcDerive ATC Class Variables
derive_vars_computedAdds Variable(s) Computed from the Analysis Value of one or...
derive_vars_dtDerive/Impute a Date from a Date Character Vector
derive_vars_dtmDerive/Impute a Datetime from a Date Character Vector
derive_vars_dtm_to_dtDerive Date Variables from Datetime Variables
derive_vars_dtm_to_tmDerive Time Variables from Datetime Variables
derive_vars_durationDerive Duration
derive_vars_dyDerive Relative Day Variables
derive_vars_extreme_eventAdd the Worst or Best Observation for Each By Group as New...
derive_var_shiftDerive Shift
derive_vars_joinedAdd Variables from an Additional Dataset Based on Conditions...
derive_vars_mergedAdd New Variable(s) to the Input Dataset Based on Variables...
derive_vars_merged_lookupMerge Lookup Table with Source Dataset
derive_vars_periodAdd Subperiod, Period, or Phase Variables to ADSL
derive_vars_queryDerive Query Variables
derive_vars_transposedDerive Variables by Transposing and Merging a Second Dataset
derive_var_trtdurdDerive Total Treatment Duration (Days)
derive_var_trtemflDerive Treatment-emergent Flag
dose_freq_lookupPre-Defined Dose Frequencies
dthcaus_sourceCreate a 'dthcaus_source' Object
dt_levelCreate a 'dt_level' object
dtm_levelCreate a 'dtm_level' object
eventCreate a 'event' Object
event_joinedCreate a 'event_joined' Object
event_sourceCreate an 'event_source' Object
example_qsExample 'QS' Dataset
ex_singleSingle Dose Exposure Dataset
extract_duplicate_recordsExtract Duplicate Records
extract_unitExtract Unit From Parameter Description
filter_existReturns records that fit into existing by groups in a...
filter_extremeFilter the First or Last Observation for Each By Group
filter_joinedFilter Observations Taking Other Observations into Account
filter_not_existReturns records that don't fit into existing by groups in a...
filter_relativeFilter the Observations Before or After a Condition is...
flag_eventCreate a 'flag_event' Object
format.basket_selectReturns a Character Representation of a 'basket_select()'...
get_admiral_optionGet the Value of an Admiral Option
get_duplicates_datasetGet Duplicate Records that Led to a Prior Error
get_flagged_recordsCreate an Existence Flag
get_hori_dataCreating Temporary Parameters and <variable>.<parameter>...
get_imputation_target_dateGet Date Imputation Targets
get_imputation_target_timeGet Time Imputation Targets
get_joined_dataJoin Data for "joined" functions
get_many_to_one_datasetGet Many to One Values that Led to a Prior Error
get_not_mappedGet list of records not mapped from the lookup table.
get_one_to_many_datasetGet One to Many Values that Led to a Prior Error
get_partialdatetimeParse DTC variable and Determine Components
get_summary_recordsCreate Summary Records
get_terms_from_dbGet Terms from the Queries Database
get_vars_queryGet Query Variables
impute_dtc_dtImpute Partial Date Portion of a "–DTC" Variable
impute_dtc_dtmImpute Partial Date(-time) Portion of a "–DTC" Variable
list_all_templatesList All Available ADaM Templates
list_tte_source_objectsList all 'tte_source' Objects Available in a Package
max_condMaximum Value on a Subset
min_condMinimum Value on a Subset
negate_varsNegate List of Variables
paramsCreate a Set of Parameters
pipePipe operator
print.adam_templatesPrint 'adam_templates' Objects
print.duplicatesPrint 'duplicates' Objects
print_named_listPrint Named List
print.sourcePrint 'source' Objects
queriesQueries Dataset
queries_mhQueries MH Dataset
queryCreate an 'query' object
records_sourceCreate a 'records_source' Object
reexport-descdplyr desc
reexport-exprsrlang exprs
restrict_derivationExecute a Derivation on a Subset of the Input Dataset
restrict_imputed_dtc_dtRestrict Imputed DTC date to Minimum/Maximum Dates
restrict_imputed_dtc_dtmRestrict Imputed DTC date to Minimum/Maximum Dates
set_admiral_optionsSet the Value of Admiral Options
signal_duplicate_recordsSignal Duplicate Records
slice_derivationExecute a Derivation with Different Arguments for Subsets of...
tte_sourceCreate a 'tte_source' Object
tte_source_objectsPre-Defined Time-to-Event Source Objects
use_ad_templateOpen an ADaM Template Script
yn_to_numericMap '"Y"' and '"N"' to Numeric Values
admiral documentation built on June 22, 2024, 9:06 a.m.