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admixr: An Interface for Running 'ADMIXTOOLS' Analyses
An interface for performing all stages of 'ADMIXTOOLS' analyses (<https://reich.hms.harvard.edu/software>) entirely from R. Wrapper functions (D, f4, f3, etc.) completely automate the generation of intermediate configuration files, run 'ADMIXTOOLS' programs on the command-line, and parse output files to extract values of interest. This allows users to focus on the analysis itself instead of worrying about low-level technical details. A set of complementary functions for processing and filtering of data in the 'EIGENSTRAT' format is also provided.
Getting started
Browse package contents
Package details |
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| Author | Martin Petr [aut, cre] (<https://orcid.org/0000-0003-4879-8421>) |
| Maintainer | Martin Petr <contact@bodkan.net> |
| License | MIT + file LICENSE |
| Version | 0.9.1 |
| URL | https://github.com/bodkan/admixr |
| Package repository | View on CRAN |
| Installation |
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