check_cat: Create an overview of the available categories

In amp.dm: Data Management Tools for Pharmacometrics

Create an overview of the available categories

Description

This function reports information for the categories, mainly the frequencies, proportions and missing values

Usage

check_cat(x, missing = c(-999, NA), detail = 5, threshold = c(NA, NA))

Arguments

x	numeric vector with the categories
missing	vector with the values that present missing information
detail	numeric with he level of detail to print (see below for details)
threshold	numeric vector with the threshold numbers and proportions (see details)

Details

The detail argument can be used to print certain information:

• 5: All possible information is printed

• 4: Only the table with frequencies and proportions

• 3: Only information regarding missing data

• 2: Only a warning in case number of missing is above threshold (see below)

• 1: A named vector with the available categories that can be used in num_lump The threshold presents the absolute number (first number) and proportions (second number) to check. If either one of these numbers is above the threshold for missing values, a warning is given. This can be convenient to decide whether or not a category should be used during analyses.

Value

Nothing is returned information is printed on screen

Author(s)

Richard Hooijmaijers

Examples

dfrm   <- data.frame(cat1 = c(rep(1:5,10),-999), 
                     cat2 = c(rep(letters[1:5],10),-999))
check_cat(dfrm$cat1)
check_cat(dfrm$cat2, detail=1)                       
check_cat(dfrm$cat1,detail=2,threshold = c(NA,0.1))

amp.dm documentation built on March 13, 2026, 5:08 p.m.