Summarise the extraction of close modern analogues
summary method for class
an object of class
arguments passed to or from other methods.
An object of class
"summary.cma" with the components of an
object of class
a matrix of distances/dissimilarities. Individual columns contain the ordered close modern analogues for individual fossil samples. Rows of this matrix refer to the k-th closest analogue for each fossil sample. See notes below.
a matrix of sample names from the reference set that are close modern analogues for a fossil sample. Individual columns contain the ordered close modern analogues for individual fossil samples. Rows of this matrix refer to the k-th closest analogue for each fossil sample. See notes below.
Currently, only objects of class
analog are supported.
The number of rows in the returned matrices is equal to the maximum
number of close modern analogues identified for an individual fossil
sample. If no close modern analogues exist for an individual fossil
sample are identified, then the relevant column in
will contain all missing values and in
"samples" the string
"none". Rows of individual columns will be padded with missing
values if the number of close modern analogues for that sample is less
than the maximum number of close modern analogues identified for a
Gavin L. Simpson
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## Not run: ## continue the RLGH example from ?join example(join) ## analog matching between SWAP and RLGH core swap.analog <- analog(swapdiat, rlgh, method = "chord") swap.analog summary(swap.analog) ## close modern analogues swap.cma <- cma(swap.analog, cutoff = 0.6) swap.cma summary(swap.cma) ## End(Not run)
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