eDNA_model-class: eDNA model fit results
In artemis: Analysis and Simulation of Environmental DNA Experiments
Description
An S4 object holding the results of a model fit by eDNA_lm*
Slots
ln_concmatrix, the estimated latent variable, log(eDNA concentration)
Cq_starmatrix, the predicted CQ value for each obs
betasmatrix, the posterior estimate for each beta in the model
sigma_ln_eDNAthe estimated measurement error on ln_eDNA
formulathe formula used to fit the model
xthe model.matrix used to fit the model
std_curve_alphathe alpha for the std. curve conversion formual used
std_curve_betathe beta for the std. curve conversion formula used
upper_Cqthe upper limit for CQ
stanfitthe result from rstan::sampling
random_xdata.frame of the grouping variables used
random_sdthe estimated stdev. of each of the random effects
artemis documentation built on Sept. 9, 2021, 1:07 a.m.
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Description
An S4 object holding the results of a model fit by eDNA_lm*
Slots
ln_concmatrix, the estimated latent variable, log(eDNA concentration)
Cq_starmatrix, the predicted CQ value for each obs
betasmatrix, the posterior estimate for each beta in the model
sigma_ln_eDNAthe estimated measurement error on ln_eDNA
formulathe formula used to fit the model
xthe model.matrix used to fit the model
std_curve_alphathe alpha for the std. curve conversion formual used
std_curve_betathe beta for the std. curve conversion formula used
upper_Cqthe upper limit for CQ
stanfitthe result from rstan::sampling
random_xdata.frame of the grouping variables used
random_sdthe estimated stdev. of each of the random effects
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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