Files in artemis

Analysis and Simulation of Environmental DNA Experiments

configure

MD5

README.md

NAMESPACE

DESCRIPTION

configure.win

R/power_range.R R/parse_formula.R R/stanmodels.R R/print.R R/methods.R R/summary.R R/priors.R R/eDNA_data.R R/predict.R R/Classes.R R/prep_data.R R/model_funs.R R/plot.R R/artemis-package.R R/p_detect.R R/sim_funs.R R/loo.R R/power_funs.R R/utils.R

src/Makevars.win

src/Makevars

src/stanExports_eDNA_lmer.cc

src/stanExports_eDNA_sim_omni.cc

src/RcppExports.cpp

src/stanExports_eDNA_lm.cc

src/stanExports_eDNA_lm_zinf.h

src/stanExports_eDNA_lmer_zinf.h

src/stanExports_eDNA_lmer_zinf.cc

src/stanExports_eDNA_lmer.h

src/stanExports_eDNA_sim_omni.h

src/stanExports_eDNA_lm.h

src/stanExports_eDNA_lm_zinf.cc

inst/make_eDNA_data.R

inst/include/stan_meta_header.hpp

inst/doc/simulation.html

inst/doc/artemis-overview.html

inst/doc/modeling.Rmd inst/doc/artemis-overview.Rmd inst/doc/simulation.R inst/doc/artemis-overview.R inst/doc/simulation.Rmd

inst/doc/modeling.html

inst/doc/modeling.R

inst/stan/eDNA_lm_zinf.stan

inst/stan/eDNA_lmer.stan

inst/stan/eDNA_lmer_zinf.stan

inst/stan/eDNA_sim_omni.stan

inst/stan/eDNA_lm.stan

inst/stan/include/license.stan

build/vignette.rds

tests/testthat.R tests/testthat/test_model_funs.R tests/testthat/test_prep_data.R tests/testthat/test_sim_funs.R tests/testthat/test_lmer.R tests/testthat/test_summary.R tests/testthat/test_loo.R tests/testthat/test_parse_formula.R tests/testthat/test_lm.R tests/testthat/test_print.R tests/testthat/test_methods.R tests/testthat/test_predict.R tests/testthat/test_std_curves.R tests/testthat/test_utils.R tests/testthat/test_p_detect.R tests/testthat/test_power_funs.R tests/testthat/test_user_priors.R vignettes/modeling.Rmd vignettes/artemis-overview.Rmd vignettes/simulation.Rmd

data/sample_data.rda

man/predict.eDNA_model.Rd man/eDNA_model-class.Rd man/lnconc_to_cq.Rd man/waic.eDNA_model.Rd man/loo.eDNA_model.Rd man/eDNA_simulation-class.Rd man/ranef-eDNA_model_lmer-method.Rd man/est_power_lmer.Rd man/est_power_range_lmer.Rd man/summary.eDNA_model.Rd man/eDNA_lmer.Rd man/eDNA_data.Rd man/cq_to_lnconc.Rd man/summary.eDNA_p_detect.Rd man/plot.eDNA_model.Rd man/plot.eDNA_p_detect.Rd man/plot.eDNA_simulation.Rd man/sim_eDNA_lmer.Rd man/print.eDNA_model.Rd man/print.eDNA_simulation.Rd man/print.eDNA_p_detect.Rd man/conf_to_probs.Rd man/est_p_detect.Rd man/as.data.frame.eDNA_simulation.Rd man/summary.eDNA_simulation.Rd man/artemis-package.Rd man/normal.Rd

man/figures/logo.png

artemis documentation built on Sept. 9, 2021, 1:07 a.m.