plot.eDNA_p_detect: Plot p(detect)

In artemis: Analysis and Simulation of Environmental DNA Experiments

Description

Plot the p(detect eDNA)

Usage

## S3 method for class 'eDNA_p_detect'
plot(
  x,
  y,
  probs = c(0.025, 0.975),
  ylim = c(0, 1),
  point_size = 2.5,
  n_breaks = 5,
  error_width = rel(1.25),
  ...
)

Arguments

x	object of class eDNA_p_detect
y	ignored
probs	probabilities for error bars when a model fit is supplied
ylim	limits on the y axis
point_size	point size for the estimated p(detect)
n_breaks	passed to pretty
error_width	the width of the ends of errorbars
...	additional args passed to plot.stanfit

Details

This allows the visualization of the probability of detection producted by est_p_detect. If the object includes an interval estimate, errorbars are produced with those intervals.

Value

a ggplot object

Author(s)

Matt Espe

artemis documentation built on Sept. 9, 2021, 1:07 a.m.