R/list.batch.R

In bapred: Batch Effect Removal and Addon Normalization (in Phenotype Prediction using Gene Data)

Defines functions list.batch

Documented in list.batch

list.batch <-
function(mod){
	tmp1 <- as.factor(mod[,which(colnames(mod) == 'Batch')])
	batches <- NULL
	for (i in 1:nlevels(tmp1)){batches <- append(batches, list((1:length(tmp1))[tmp1==levels(tmp1)[i]]))}
	batches
	}

Try the bapred package in your browser