API for barrks
Calculate Bark Beetle Phenology Using Different Models

Global functions
.add_date_axis Source code
.bso_generation_data Source code
.calc_dd_onset_func Source code
.calc_dd_onset_func.tmax Source code
.calc_dd_onset_func.tmean Source code
.calc_fly Source code
.calc_onset_fly_dd_func Source code
.calc_onset_fly_dd_func.alt Source code
.calc_tmin_mortality Source code
.call_model_function Source code
.create_events Source code
.create_model Source code
.dates2update Source code
.define_model_dev_function Source code
.define_model_function Source code
.define_setup_func Source code
.df2rsts Source code
.doc_apply_models Source code
.doc_customize_call Source code
.doc_customize_description Source code
.doc_customize_models Source code
.doc_dates Source code
.doc_dev_start_end Source code
.doc_functioning_post Source code
.doc_functioning_pre Source code
.doc_generation Source code
.doc_param_dev_mortal Source code
.doc_pheno Source code
.doc_phenology_dots Source code
.doc_quiet Source code
.doc_return_pheno Source code
.doc_station Source code
.doc_stations Source code
.doy2date Source code
.extract_stations Source code
.fixed_day_mortality Source code
.get_date_of_year Source code
.get_doy_rst Source code
.get_hibernation Source code
.get_pb Source code
.is_phenology Source code
.lange_calc_development Source code
.lange_create_calc_teff Source code
.lange_develop_generation Source code
.lyr_from_date Source code
.msg Source code
.phenips_clim_get_dev_rates Source code
.process_data Source code
.restore_output Source code
.rsts2df Source code
.save_output Source code
.save_raster Source code
.storage_sub Source code
.template_rst Source code
.trigger_rst Source code
.use_storage Source code
analyse.phenology Man page
analyse.phenology.bso Man page
barrks Man page
barrks-package Man page
barrks_colors Man page Source code
barrks_data Man page Source code
barrks_labels Man page Source code
bso_calc_dd Source code
bso_calc_development Source code
bso_calc_diapause Source code
bso_calc_onset Source code
bso_calc_r_dev Source code
bso_calc_r_fly Source code
bso_calc_r_mat Source code
bso_calc_r_phloem Source code
bso_calc_r_rep Source code
bso_calc_thourly Source code
bso_calc_tphloem Source code
bso_develop_generation Source code
bso_get_flight Man page
bso_get_flight_df Man page Source code
bso_get_flight_rst Man page Source code
bso_get_individuals Man page
bso_get_individuals_df Man page Source code
bso_get_individuals_rst Man page Source code
bso_phenology Man page Source code
bso_plot_flight_diagram Man page Source code
bso_plot_stage_diagram Man page Source code
bso_slots_total Source code
bso_stage Source code
bso_translate_phenology Man page Source code
categorize_generations_rst Man page Source code
create_daylength_df Man page Source code
create_daylength_rst Man page Source code
create_diapause Man page Source code
create_events Man page
create_mortality Man page Source code
create_onset Man page Source code
create_suntimes_df Man page Source code
create_suntimes_rsts Man page Source code
get_development Man page
get_development_df Man page Source code
get_development_rst Man page Source code
get_diapause Man page
get_diapause_df Man page Source code
get_diapause_rst Man page Source code
get_events Man page
get_generations Man page
get_generations_df Man page Source code
get_generations_rst Man page Source code
get_hibernating_generations_df Man page Source code
get_hibernating_generations_rst Man page Source code
get_input_data Man page Source code
get_mortality Man page
get_mortality_df Man page Source code
get_mortality_rst Man page Source code
get_onset Man page
get_onset_df Man page Source code
get_onset_rst Man page Source code
joensson_calc_development Source code
joensson_calc_diapause Source code
joensson_calc_onset Source code
joensson_calc_teff Source code
list_models Man page Source code
load_phenology Man page Source code
model Man page Source code
model.bso.apply Man page
model.bso.customize Man page
model.chapy.apply Man page
model.chapy.customize Man page
model.joensson.apply Man page
model.joensson.customize Man page
model.lange.apply Man page
model.lange.customize Man page
model.phenips.apply Man page
model.phenips.customize Man page
model.phenips_clim.apply Man page
model.phenips_clim.customize Man page
model.rity.apply Man page
model.rity.customize Man page
model_combine Man page Source code
params Man page Source code
phenips_calc_btmax Source code
phenips_calc_btmean Source code
phenips_calc_development Source code
phenips_calc_diapause Source code
phenips_calc_mortality Source code
phenips_calc_teff Source code
phenips_clim_calc_development Source code
phenips_clim_calc_diapause Source code
phenips_clim_calc_mortality Source code
phenips_clim_calc_onset Source code
phenips_clim_calc_teff Source code
phenips_clim_use_scenario Source code
phenips_develop_generation Source code
phenology Man page Source code
plot_development_diagram Man page Source code
prop_dates Man page Source code
prop_filial_generations Man page Source code
prop_first_date Man page Source code
prop_hatched_generations Man page Source code
prop_last_date Man page Source code
prop_sister_broods Man page Source code
prop_stations Man page Source code
prop_year Man page Source code
properties Man page
rity_calc_teff Source code
save_load_phenology Man page
save_phenology Man page Source code
stations Man page
stations_assign Man page Source code
stations_cells Man page Source code
stations_create Man page Source code
stations_names Man page Source code
barrks documentation built on April 3, 2025, 9:47 p.m.