Files in bayesnec

A Bayesian No-Effect- Concentration (NEC) Algorithm

NEWS.md README.md R/validate_loo_controls.R R/capture_family.R R/prebayesnecfit-class.R R/pull_prior.R R/models.R R/compare_fitted.R R/fit_bayesnec.R R/posterior_predict.R R/validate_priors.R R/expand_classes.R R/print.R R/summary.R R/bnec.R R/rhat.R R/nec.R R/posterior_epred.R R/manecsummary-class.R R/bayesnec-package.R R/set_distribution.R R/add_criteria.R R/extract_simdat.R R/data.R R/inits_functions.R R/predict.R R/model.frame.R R/bayesnecformula.R R/validate_family.R R/sample_priors.R R/check_chains.R R/pred_equations.R R/plot.R R/define_prior.R R/show_params.R R/dispersion.R R/amend.R R/bayesmanecfit-class.R R/check_priors.R R/check_models.R R/bnecfit-methods.R R/compare_posterior.R R/nsec.R R/bayesnecfit-class.R R/check_data.R R/fitted.R R/necsummary-class.R R/ecx.R R/bnecfit-class.R R/bnec_newdata.R R/helpers.R R/autoplot.R R/pull_out.R R/average_estimates.R R/pull_brmsfit.R R/formula.R R/compare_estimates.R inst/doc/example3.Rmd inst/doc/example4.Rmd inst/doc/example2b.Rmd inst/doc/example2.Rmd inst/doc/example5.Rmd inst/doc/example1.Rmd tests/testthat.R tests/testthat/test-check_formula.R tests/testthat/test-check_models.R tests/testthat/test-pull_out.R tests/testthat/test-wrangle_model_formula.R tests/testthat/test-set_distribution.R tests/testthat/test-amend.R tests/testthat/test-bayesmanec_methods.R tests/testthat/test-nsec.R tests/testthat/test-bayesnec_methods.R tests/testthat/test-nec.R tests/testthat/test-modname.R tests/testthat/test-expand_classes.R tests/testthat/test-check_priors.R tests/testthat/test-validate_loo_controls.R tests/testthat/test-model.frame.R tests/testthat/test-dispersion.R tests/testthat/test-data.R tests/testthat/test-substitute_x_in_formula.R tests/testthat/test-compare_fitted.R tests/testthat/test-bayesnecformula.R tests/testthat/test-check_chains.R tests/testthat/test-make_brmsformula.R tests/testthat/test-average_estimates.R tests/testthat/test-bnec.R tests/testthat/test-helpers.R tests/testthat/test-ecx.R tests/testthat/test-compare_posterior.R tests/testthat/setup.R tests/testthat/test-define_prior.R tests/testthat/test-compare_estimates.R vignettes/vignette-fig-exmp2b-theoretical_nec_curves.pdf vignettes/vignette-fig-exmp2-allmods-1.pdf vignettes/example3.Rmd vignettes/example4.Rmd vignettes/example2b.Rmd vignettes/exmp2b_theoretical_curves.R vignettes/vignette-fig-exmp1-beta-1.pdf vignettes/vignette-fig-exmp1-binom-1.pdf vignettes/vignette-fig-exmp1-gammabase-1.pdf vignettes/vignette-fig-exmp1-negbinbase-1.pdf vignettes/vignette-fig-exmp2-checkpriors-1.pdf vignettes/vignette-fig-exmp1-poisson-1.pdf vignettes/vignette-fig-exmp2-pretty-1.pdf vignettes/example2.Rmd vignettes/example5.Rmd vignettes/vignette-fig-exmp2-goodmod-1.pdf vignettes/vignette-fig-exmp4-probplot-1.pdf vignettes/example1.Rmd vignettes/vignette-fig-exmp4-fitted-1.pdf vignettes/precompile.R vignettes/vignette-fig-exmp2b-theoretical_ecx_curves.pdf vignettes/vignette-fig-exmp3-checkpriors-1.pdf vignettes/vignette-fig-exmp4-fitteddiff-1.pdf vignettes/vignette-fig-exmp4-differences-1.pdf vignettes/vignette-fig-exmp2-decline-1.pdf vignettes/vignette-fig-exmp2-ecx4param-1.pdf vignettes/vignette-fig-exmp4-posterior-1.pdf vignettes/vignette-fig-exmp1-bbinom-1.pdf man/amend.Rd man/check_chains.Rd man/fitted.Rd man/update.bnecfit.Rd man/herbicide.Rd man/sample_priors.Rd man/predict.Rd man/bayesnecformula.Rd man/rhat.Rd man/bayesnec-package.Rd man/autoplot.Rd man/quote-beta_binomial-quote.Rd man/average_estimates.Rd man/necsummary-class.Rd man/nec_data.Rd man/make_brmsformula.Rd man/is_manecsummary.Rd man/ecx.Rd man/plus-.bnecfit.Rd man/is_necsummary.Rd man/bnecfit-class.Rd man/manec_example.Rd man/check_priors.Rd man/ggbnec_data.Rd man/formula.Rd man/prebayesnecfit-class.Rd man/model.frame.Rd man/posterior_epred.Rd man/pull_brmsfit.Rd man/c.bnecfit.Rd man/manecsummary-class.Rd man/compare_posterior.Rd man/nsec.Rd man/pull_prior.Rd man/print.Rd man/expand_nec.Rd man/step.Rd man/models.Rd man/plot.Rd man/expand_manec.Rd man/bnec.Rd man/nec.Rd man/pull_out.Rd man/show_params.Rd man/bayesnecfit-class.Rd man/compare_fitted.Rd man/bayesmanecfit-class.Rd man/check_formula.Rd man/dispersion.Rd man/summary.Rd man/posterior_predict.Rd man/bnec_newdata.Rd man/compare_estimates.Rd