Nothing
#' Creates the three logger sections of a BEAST2 XML parameter file
#'
#' The logger section has these elements:
#' \preformatted{
#' <logger id="tracelog" [...]>
#' [...]
#' </logger>
#' <logger id="screenlog" [...]>
#' [...]
#' </logger>
#' <logger id="treelog.t:[alignment ID]" [...]>
#' [...]
#' </logger>
#' }
#' @inheritParams default_params_doc
#' @return lines of XML text
#' @seealso
#' Use \link{create_tracelog_xml} to create the XML text
#' of the logger with the \code{tracelog} ID.
#' Use \link{create_screenlog_xml} to create the XML text
#' of the logger with the \code{screenlog} ID.
#' Use \link{create_treelog_xml} to create the XML text
#' of the loggers with the \code{treelog} ID.
#' @author Richèl J.C. Bilderbeek
#' @export
create_loggers_xml <- function(
input_filename,
inference_model
) {
check_true(length(input_filename) == 1)
check_inference_model(inference_model)
tracelog_text <- create_tracelog_xml(
input_filename = input_filename,
inference_model = inference_model
)
screenlog_text <- create_screenlog_xml(inference_model)
treelogs_text <- create_treelog_xml(inference_model)
c(
indent(tracelog_text),
"",
indent(screenlog_text),
indent(treelogs_text)
)
}
Any scripts or data that you put into this service are public.
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.