betapart: Partitioning Beta Diversity into Turnover and Nestedness Components
Version 1.4-1

Functions to compute pair-wise dissimilarities (distance matrices) and multiple-site dissimilarities, separating the turnover and nestedness-resultant components of taxonomic (incidence and abundance based), functional and phylogenetic beta diversity.

Browse man pages Browse package API and functions Browse package files

AuthorAndres Baselga, David Orme, Sebastien Villeger, Julien De Bortoli and Fabien Leprieur
Date of publication2017-01-24 14:20:36
MaintainerAndres Baselga <andres.baselga@usc.es>
LicenseGPL (>= 2)
Version1.4-1
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("betapart")

Man pages

bbsData: BBS data by state for two timeslices
beta.multi: Multiple-site dissimilarities
beta.multi.abund: Abundance-based multiple-site dissimilarities
beta.pair: Incidence-based pair-wise dissimilarities
beta.pair.abund: Abundance-based pair-wise dissimilarities
betapart.core: Core calculations of betapart
betapart.core.abund: Core calculations of betapart for abundance-based...
betapart-package: Partitioning beta diversity into turnover and nestedness...
beta.sample: Resampling multiple-site dissimilarity for n sites
beta.sample.abund: Resampling abundance-based multiple-site dissimilarity for n...
beta.temp: Temporal change in community composition
bray.part: Partitioning pair-wise Bray-Curtis dissimilarities
ceram.n: Cerambycidae from Northern European Countries
ceram.s: Cerambycidae from Southern European Countries
functional.beta.multi: Multiple-site functional dissimilarities
functional.beta.pair: Pair-wise functional dissimilarities
functional.betapart.core: Core calculations of functional dissimilarities metrics
phylo.beta.multi: Multiple-site phylogenetic dissimilarities
phylo.beta.pair: Pair-wise phylogenetic dissimilarities
phylo.betapart.core: Core calculations of phylogenetic dissimilarities metrics

Functions

bbs1980 Man page
bbs2000 Man page
bbsData Man page
beta.multi Man page Source code
beta.multi.abund Man page Source code
beta.pair Man page Source code
beta.pair.abund Man page Source code
beta.sample Man page Source code
beta.sample.abund Man page Source code
beta.temp Man page Source code
betapart Man page
betapart-package Man page
betapart.core Man page Source code
betapart.core.abund Man page Source code
bray.part Man page Source code
ceram.n Man page
ceram.s Man page
functional.beta.multi Man page Source code
functional.beta.pair Man page Source code
functional.betapart.core Man page Source code
phylo.beta.multi Man page Source code
phylo.beta.pair Man page Source code
phylo.betapart.core Man page Source code

Files

NAMESPACE
data
data/ceram.n.txt.xz
data/bbsData.rda
data/ceram.s.txt.xz
R
R/betapart-core.R
R/beta-multi-abund.R
R/betapart.R
R/functional.beta.pair.R
R/functional.betapart.core.R
R/beta-pair-abund.R
R/phylo.beta.pair.r
R/beta-temporal.R
R/phylo.betapart.core.r
R/beta-sample-abund.R
R/functional.beta.multi.R
R/bray-part.R
R/betapart-core-abund.R
R/beta-sample.R
R/phylo.beta.multi.r
MD5
DESCRIPTION
man
man/bray.part.Rd
man/phylo.betapart.core.rd
man/functional.beta.pair.Rd
man/beta.multi.abund.Rd
man/beta.sample.Rd
man/phylo.beta.multi.rd
man/betapart.core.abund.Rd
man/functional.betapart.core.Rd
man/beta.temp.Rd
man/ceram.s.Rd
man/beta.pair.abund.Rd
man/ceram.n.Rd
man/phylo.beta.pair.rd
man/beta.pair.Rd
man/beta.multi.Rd
man/beta.sample.abund.Rd
man/bbsData.Rd
man/betapart.core.Rd
man/functional.beta.multi.Rd
man/betapart-package.Rd
.Rinstignore
betapart documentation built on May 20, 2017, 12:57 a.m.