plotQtl: QTL mapping plot

In binmapr: Call Marker from Snp Data using Binmap

Description

QTL mapping plot

Usage

plotQtl(pos, pvalue, ylab = "LOD", chr.name = "", ymax = 10,
  threshold = 2, ...)

Arguments

pos	position of each p value
pvalue	p value
ylab	y lab
chr.name	chromosome name
ymax	y max
threshold	QTL threshold
...	other parameter pass to base::plot

Value

a LOD distribution by the chromsome

Author(s)

Zhougeng Xu

Examples

pos <- c(1,100,200,210,230,300,500,600,700,1000)
pvalue <- c(0.1,0.05,0.05,0.05,0.01,0.001,0.01,0.05,0.05,0.1)
plotQtl(pos, pvalue, ymax = 3)

binmapr documentation built on Oct. 30, 2019, 12:14 p.m.