Man pages for bioOED
Sensitivity Analysis and Optimum Experiment Design for Microbial Inactivation
| calculate_FIM | Calculation of Fisher Information Matrix |
| calculate_isothermal_FIM | Fisher Information Matrix for isothermal experiments |
| calculate_limit | "Detection" limit for each model |
| calculate_pars_correlation | Correlation Between Model Parameters Sensitivities |
| criterium_A_iso | Objective function for A-optimal OED with detection limit |
| criterium_Amod_iso | Objective function for A modified-optimal OED with detection... |
| criterium_D | D Optimality Criterium |
| criterium_D_iso | Objective function for D-optimal OED with detection limit |
| criterium_E_iso | Objective function for E-optimal OED with detection limit |
| criterium_Emod_iso | Objective function for E modified-optimal OED with detection... |
| criterium_modE | Modified-E Optimality Criterium |
| detection_bigelow | Detection limit of the Bigelow model |
| detection_mafart | Detection limit of the Mafart model |
| detection_peleg | Detection limit of the Peleg model |
| detFIM | Objective function for D-optimal OED |
| get_detection | Calculate detection limit |
| get_isothermal_correlation | Parameter correlation for isothermal inactivation experiments |
| inactivation_OED | Optimum Experimental Design of Microbial Inactivation |
| inactivation_OED_penalty | Optimum Experimental Design of Microbial Inactivation with... |
| inactivation_sens_handler | Handler for the calculation of sensitivities of inactivation... |
| isothermal_OED | Optimal Experiment Design of isothermal inactivation |
| isothermal_OED_limit | OED of isothermal microbial inactivation with detection limit |
| isothermal_sensitivities | Local sensitivites of isothermal microbial inactivation |
| objective_D | Objective Function for the D Criterium |
| objective_D_penalty | Objective Function for the D Criterium with Penalty |
| objective_Emod | Objective Function for the modified-E Criterium |
| objective_Emod_penalty | Objective Function for the modified-E Criterium with Penalty |
| optimize_refTemp | Optimization of the Reference Temperature |
| penalty_function | Penalty Function for OED |
| plot.IsoSensitivities | Plotting of IsoSensitivities objects |
| plot.OEDinactivation | Plot of OEDinactivation |
| plot.OEDisothermal | Plot of OEDisothermal object |
| plot.parCorrelation | Correlation Plot of Parameter Sensitivities |
| refTemp_optim_handler | Hanlder for the Optimization of Reference Temperature |
| sensitivities_Bigelow | Local sensitivities of the Bigelow model |
| sensitivities_Mafart | Local sensitivities of the Mafart model |
| sensitivities_Peleg | Local sensitivities of the Peleg model |
| sensitivity_inactivation | Local sensitivities of microbial inactivation |
