filterImage3d: Apply filter to 3D images

In bioimagetools: Tools for Microscopy Imaging

Apply filter to 3D images

Description

A filter is applied to a 3D array representing an image. So far only variance filters are supported.

Usage

filterImage3d(img, filter = "var", window, z.scale = 1, silent = FALSE)

Arguments

img	is a 3d array representing an image.
filter	is the filter to be applied. Options: var: Variance filter.
window	half size of window; i.e. window=1 uses a window of 3 voxels in each direction.
z.scale	ratio of voxel dimension in x/y direction and z direction.
silent	Logical. If FALSE, information on progress will be printed.

Value

Multi-dimensional array of filtered image data.

bioimagetools documentation built on May 28, 2022, 5:06 p.m.