Yeast.STRING.data: Yeast interactions from STRING

Description Usage Format Source References Examples

Description

Binary protein-protein interactions from the STRING data base (von Mering et al. 2002), representing interaction data from yeast two-hybrid assay, mass-spectrometry of purified complexes, correlated mRNA expression and genetic interactions.

Usage

1

Format

Binary named matrix. Entry Yeast.Biogrid.STRING[i,j] = 1 if there is an interaction between gene i and j, otherwise Yeast.STRING.data[i,j] = 0.

Source

http://string-db.org

References

von Mering, C., Krause, R., Snel, B., Cornell, M., Oliver, S., Fields, S., and Bork, P. (2002). Comparative assessment of large-scale data sets of protein-protein interactions. Nature, 417, 399-403.

Examples

1

bionetdata documentation built on May 29, 2017, 7:55 p.m.