pFinalSize: Final outbreak size probability

In branchingprocess: Calculate Outbreak Probabilities for a Branching Process Model

Final outbreak size probability

Description

Final outbreak size probability

Usage

pFinalSize(n, j, R, k)

Arguments

n	Number of initial cases in generation 0
j	Total outbreak size (>= n).
R	Mean of negative binomial offspring distribution
k	Dispersion of negative binomial offspring distribution

Value

The final size probability

Examples

# With 5 initial individuals and negative binomial offspring distribution with mean R=0.2
# and dispersion k=0.1, gives the probability of outbreak extinction with a total number
# final outbreak size of exactly 5 to 20 individuals (including the initial 5):
pFinalSize(5, 5:20, R=0.2, k=0.1)

branchingprocess documentation built on June 8, 2025, 11:35 a.m.