breakpoint: An R Package for Multiple Break-Point Detection via the Cross-Entropy Method
Version 1.2

Implements the Cross-Entropy (CE) method, which is a model based stochastic optimization technique to estimate both the number and their corresponding locations of break-points in continuous and discrete measurements (Priyadarshana and Sofronov (2015), Priyadarshana and Sofronov (2012a), Priyadarshana and Sofronov (2012b)).

AuthorPriyadarshana W.J.R.M. and Georgy Sofronov
Date of publication2016-01-13 14:39:45
MaintainerPriyadarshana W.J.R.M. <mjayawardana@swin.edu.au>
LicenseGPL (>= 2)
Version1.2
URL https://github.com/madawaweer/breakpoint
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("breakpoint")

Getting started

Package overview

Popular man pages

breakpoint-package: Multiple Break-Point Detection via the Cross-Entropy Method
CE.NB: Multiple Break-point Detection via the CE Method with...
CE.NB.Init: Multiple Break-point Detection via the CE Method with...
CE.Normal.Init.MeanVar: Multiple break-point detection via the CE method for...
CE.Normal.MeanVar: Multiple break-point detection via the CE method for...
CE.ZINB: Multiple Break-point Detection via the CE Method with...
CE.ZINB.Init: Multiple Break-point Detection via the CE Method with...
See all...

All man pages Function index File listing

Man pages

breakpoint-package: Multiple Break-Point Detection via the Cross-Entropy Method
CE.NB: Multiple Break-point Detection via the CE Method with...
CE.NB.Init: Multiple Break-point Detection via the CE Method with...
CE.Normal.Init.Mean: Multiple break-point detection via the CE method for...
CE.Normal.Init.MeanVar: Multiple break-point detection via the CE method for...
CE.Normal.Mean: Multiple Break-point Detection via the CE Method for...
CE.Normal.MeanVar: Multiple break-point detection via the CE method for...
CE.ZINB: Multiple Break-point Detection via the CE Method with...
CE.ZINB.Init: Multiple Break-point Detection via the CE Method with...
ch1.GM03563: Fibroblast cell line (GM03563) data
profilePlot: Mean profile plot

Functions

AIC.MeanNormal Source code
AIC.MeanVarNormal Source code
AICnb Source code
AICzinb Source code
BIC.MeanNormal Source code
BIC.MeanVarNormal Source code
BICnb Source code
BICzinb Source code
CE.NB Man page Source code
CE.NB.Init Man page Source code
CE.Normal.Init.Mean Man page Source code
CE.Normal.Init.MeanVar Man page Source code
CE.Normal.Mean Man page Source code
CE.Normal.MeanVar Man page Source code
CE.ZINB Man page Source code
CE.ZINB.Init Man page Source code
betaIntEst Source code
betarand Source code
breakpoint Man page
breakpoint-package Man page
ce.4betaNB.AIC Source code
ce.4betaNB.AIC.Init Source code
ce.4betaNB.BIC Source code
ce.4betaNB.BIC.Init Source code
ce.4betaZINB Source code
ce.4betaZINB.AIC Source code
ce.4betaZINB.AIC.Init Source code
ce.4betaZINB.BIC Source code
ce.4betaZINB.BIC.Init Source code
ce.sim4beta Source code
ce.sim4beta.Init.Mean.AIC Source code
ce.sim4beta.Init.Mean.BIC Source code
ce.sim4beta.Init.MeanVar.AIC Source code
ce.sim4beta.Init.MeanVar.BIC Source code
ce.sim4beta.Init.mBIC Source code
ce.sim4beta.MeanAIC Source code
ce.sim4beta.MeanBIC Source code
ce.sim4beta.MeanVar.AIC Source code
ce.sim4beta.MeanVar.BIC Source code
ce.simNormalNB.AIC Source code
ce.simNormalNB.AIC.Init Source code
ce.simNormalNB.BIC Source code
ce.simNormalNB.BIC.Init Source code
ce.simNormalZINB Source code
ce.simNormalZINB.AIC Source code
ce.simNormalZINB.AIC.Init Source code
ce.simNormalZINB.BIC Source code
ce.simNormalZINB.BIC.Init Source code
ce.simnormal Source code
ce.simnormal.Init.Mean.AIC Source code
ce.simnormal.Init.Mean.BIC Source code
ce.simnormal.Init.MeanVar.AIC Source code
ce.simnormal.Init.MeanVar.BIC Source code
ce.simnormal.Init.mBIC Source code
ce.simnormal.MeanAIC Source code
ce.simnormal.MeanBIC Source code
ce.simnormal.MeanVar.AIC Source code
ce.simnormal.MeanVar.BIC Source code
ch1.GM03563 Man page
fun.alpha Source code
fun.beta Source code
llhood.MeanNormal Source code
llhood.MeanVarNormal Source code
llhoodnb Source code
llhoodzinb Source code
loglik.MeanNormal Source code
loglik.MeanVarNormal Source code
logliknb Source code
loglikzinb Source code
mBIC Source code
normrand Source code
plott Source code
profilePlot Man page Source code

Files

NAMESPACE
NEWS
data
data/ch1.GM03563.rda
R
R/llhoodnb.R
R/ce.simNormalNB.BIC.Init.R
R/ce.4betaZINB.AIC.Init.R
R/AICnb.R
R/betaIntEst.R
R/ce.4betaZINB.BIC.R
R/ce.simnormal.Init.Mean.BIC.R
R/ce.sim4beta.Init.MeanVar.AIC.R
R/plott.R
R/ce.4betaNB.BIC.R
R/AIC.MeanVarNormal.R
R/loglik.MeanNormal.R
R/ce.simnormal.MeanVar.BIC.R
R/CE.Normal.MeanVar.R
R/llhood.MeanVarNormal.R
R/ce.sim4beta.MeanVar.AIC.R
R/CE.Normal.Mean.R
R/CE.NB.R
R/ce.sim4beta.Init.MeanVar.BIC.R
R/CE.NB.Init.R
R/profilePlot.R
R/CE.Normal.Init.Mean.R
R/BICnb.R
R/AIC.MeanNormal.R
R/ce.sim4beta.MeanBIC.R
R/llhood.MeanNormal.R
R/ce.4betaZINB.R
R/ce.simNormalZINB.AIC.Init.R
R/CE.ZINB.Init.R
R/fun.beta.R
R/ce.simNormalZINB.BIC.Init.R
R/ce.simnormal.MeanBIC.R
R/CE.Normal.Init.MeanVar.R
R/AICzinb.R
R/ce.simNormalNB.AIC.R
R/logliknb.R
R/breakpoint-internal.R
R/fun.alpha.R
R/loglik.MeanVarNormal.R
R/ce.sim4beta.Init.Mean.AIC.R
R/ce.simnormal.MeanAIC.R
R/ce.4betaNB.BIC.Init.R
R/ce.simnormal.Init.MeanVar.BIC.R
R/ce.simnormal.MeanVar.AIC.R
R/ce.sim4beta.R
R/ce.sim4beta.Init.Mean.BIC.R
R/BIC.MeanNormal.R
R/ce.simnormal.Init.Mean.AIC.R
R/betarand.R
R/BICzinb.R
R/mBIC.R
R/ce.simnormal.R
R/ce.simNormalNB.AIC.Init.R
R/ce.4betaNB.AIC.R
R/ce.simNormalZINB.R
R/loglikzinb.R
R/normrand.R
R/ce.4betaNB.AIC.Init.R
R/ce.simnormal.Init.mBIC.R
R/CE.ZINB.R
R/ce.4betaZINB.BIC.Init.R
R/BIC.MeanVarNormal.R
R/ce.simNormalZINB.BIC.R
R/ce.4betaZINB.AIC.R
R/ce.simNormalZINB.AIC.R
R/llhoodzinb.R
R/ce.simnormal.Init.MeanVar.AIC.R
R/ce.simNormalNB.BIC.R
R/ce.sim4beta.MeanAIC.R
R/ce.sim4beta.Init.mBIC.R
R/ce.sim4beta.MeanVar.BIC.R
MD5
DESCRIPTION
man
man/ch1.GM03563.Rd
man/CE.ZINB.Rd
man/profilePlot.Rd
man/CE.Normal.MeanVar.Rd
man/CE.Normal.Init.MeanVar.Rd
man/CE.Normal.Mean.Rd
man/CE.Normal.Init.Mean.Rd
man/breakpoint-package.Rd
man/CE.NB.Rd
man/CE.NB.Init.Rd
man/CE.ZINB.Init.Rd
breakpoint documentation built on May 19, 2017, 8:10 a.m.

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