Description Usage Format Details References Examples
Chromosome 1 of cell line GM03563
1 | data("ch1.GM03563")
|
A single column data frame with 135 observations corresponds to chromosome 1 of cell line GM03563.
log2ratio
normalized average of the log base 2 test over reference ratio data
This data set is extracted from a single experiments on 15 fibroblast cell lines with each array containing over 2000 (mapped) BACs spotted in triplicate discussed in Snijders et al.(2001). Data corresponds to the chromosome 1 of cell line GM03563.
Snijders,A.M. et al. (2001) Assembly of microarrays for genome-wide measurement of DNA copy number. Nature Genetics, 29, 263-26.
1 2 3 4 5 6 7 8 9 10 11 | data(ch1.GM03563)
## Not run:
## CE with four parameter beta distribution ##
obj1 <- CE.Normal.Mean(ch1.GM03563, distyp = 1, parallel =TRUE)
profilePlot(obj1, ch1.GM03563)
## CE with truncated normal distribution ##
obj2 <- CE.Normal.Mean(ch1.GM03563, distyp = 2, parallel =TRUE)
profilePlot(obj2, ch1.GM03563)
## End(Not run)
|
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.