Chromosome 1 of cell line GM03563
A single column data frame with 135 observations corresponds to chromosome 1 of cell line GM03563.
normalized average of the log base 2 test over reference ratio data
This data set is extracted from a single experiments on 15 fibroblast cell lines with each array containing over 2000 (mapped) BACs spotted in triplicate discussed in Snijders et al.(2001). Data corresponds to the chromosome 1 of cell line GM03563.
Snijders,A.M. et al. (2001) Assembly of microarrays for genome-wide measurement of DNA copy number. Nature Genetics, 29, 263-26.
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data(ch1.GM03563) ## Not run: ## CE with four parameter beta distribution ## obj1 <- CE.Normal.Mean(ch1.GM03563, distyp = 1, parallel =TRUE) profilePlot(obj1, ch1.GM03563) ## CE with truncated normal distribution ## obj2 <- CE.Normal.Mean(ch1.GM03563, distyp = 2, parallel =TRUE) profilePlot(obj2, ch1.GM03563) ## End(Not run)
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