phenoOrd: Phenotypic information for GLS (ordinal trait)
In brnn: Bayesian Regularization for Feed-Forward Neural Networks
phenoOrd R Documentation
Phenotypic information for GLS (ordinal trait)
Description
The format of the phenotype dataframe is Location (Loc),
Replicate (Rep), Genotype ID (Stock) and rating (ordinal score).
Gray Leaf Spot (GLS) is a disease caused by the fungus
Cercospora zeae-maydis. This dataset consists of
genotypic and phenotypic information for 278 maize lines from
the Drought Tolerance Maize (DTMA) project of CIMMYT's Global
Maize Program. The dataset includes information on disease
severity measured on an ordinal scale with 5 points:
1= no disease, 2= low infection, 3=moderate infection,
4=high infection and 5=totally infected.
Source
International Maize and Wheat Improvement Center (CIMMYT), Mexico.
References
Montesinos-Lopez, O., A. Montesinos-Lopez, J. Crossa, J. Burgueno and K. Eskridge. 2015. "Genomic-Enabled Prediction of Ordinal Data with Bayesian Logistic Ordinal Regression". G3: Genes | Genomes | Genetics, 5, 2113-2126.
brnn documentation built on Nov. 10, 2023, 9:08 a.m.
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| phenoOrd | R Documentation |
Phenotypic information for GLS (ordinal trait)
Description
The format of the phenotype dataframe is Location (Loc), Replicate (Rep), Genotype ID (Stock) and rating (ordinal score). Gray Leaf Spot (GLS) is a disease caused by the fungus Cercospora zeae-maydis. This dataset consists of genotypic and phenotypic information for 278 maize lines from the Drought Tolerance Maize (DTMA) project of CIMMYT's Global Maize Program. The dataset includes information on disease severity measured on an ordinal scale with 5 points: 1= no disease, 2= low infection, 3=moderate infection, 4=high infection and 5=totally infected.
Source
International Maize and Wheat Improvement Center (CIMMYT), Mexico.
References
Montesinos-Lopez, O., A. Montesinos-Lopez, J. Crossa, J. Burgueno and K. Eskridge. 2015. "Genomic-Enabled Prediction of Ordinal Data with Bayesian Logistic Ordinal Regression". G3: Genes | Genomes | Genetics, 5, 2113-2126.
R Package Documentation
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We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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