CRISPR-Analyzer for pooled CRISPR screens (caRpools) provides an end-to-end analysis of CRISPR screens including quality control, hit candidate analysis, visualization and automated report generation using R markdown. Needs MAGeCK (http://sourceforge.net/p/mageck/wiki/Home/), bowtie2 for all functions. CRISPR (clustered regularly interspaced short palindromic repeats) is a method to perform genome editing. See
|Author||Jan Winter, Florian Heigwer|
|Date of publication||2015-12-06 13:31:59|
|Maintainer||Jan Winter <[email protected]>|
|Package repository||View on CRAN|
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