caRpools: CRISPR AnalyzeR for Pooled CRISPR Screens
Version 0.83

CRISPR-Analyzer for pooled CRISPR screens (caRpools) provides an end-to-end analysis of CRISPR screens including quality control, hit candidate analysis, visualization and automated report generation using R markdown. Needs MAGeCK (http://sourceforge.net/p/mageck/wiki/Home/), bowtie2 for all functions. CRISPR (clustered regularly interspaced short palindromic repeats) is a method to perform genome editing. See for more information on CRISPR.

Package details

AuthorJan Winter, Florian Heigwer
Date of publication2015-12-06 13:31:59
MaintainerJan Winter <jan.winter@dkfz-heidelberg.de>
LicenseGPL
Version0.83
URL http://www.crispr-analyzer.de https://github.com/boutroslab/caRpools
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("caRpools")

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caRpools documentation built on May 30, 2017, 2:52 a.m.