Files in campsis
Generic PK/PD Simulation Platform Campsis

MD5

LICENSE.note

NAMESPACE

DESCRIPTION

R/declare_settings.R R/covariate.R R/distribution.R R/events.R R/occasion.R R/time_vector.R R/dose_adaptation.R R/scatter_plot.R R/treatment_iovs.R R/simulation_progress.R R/nocb_settings.R R/check.R R/utilities.R R/time_utilities.R R/internal_settings.R R/arm.R R/treatment_entry.R R/event_logic.R R/covariates.R R/json_interface.R R/event.R R/shaded_plot.R R/observations_set.R R/data.R R/simulate.R R/outfun.R R/treatment_iov.R R/generic.R R/campsis_plot_helpers.R R/scenario_action.R R/arms.R R/hardware_settings.R R/dose_adaptations.R R/all_classes.R R/progress_settings.R R/solver_settings.R R/default_plot.R R/global.R R/scenarios.R R/deprecated_methods.R R/vpc_plot.R R/outfuns.R R/scenario.R R/simulate_preprocess.R R/observations.R R/dataset_summary.R R/spaghetti_plot.R R/simulation_engine.R R/plan_setup.R R/time_entry.R R/bootstrap.R R/default_settings.R R/campsis_metadata.R R/treatment.R R/scenario_actions.R R/outfun_core.R R/dataset.R R/dataset_config.R R/seed.R R/protocol.R R/simulation_settings.R R/occasions.R R/repeated_schedule.R inst/doc/v17_run_simulation_in_parallel.Rmd inst/doc/v03_covariates.R inst/doc/v05_lag_time.R inst/doc/v04_bioavailability.Rmd inst/doc/v01_dataset.Rmd

inst/doc/v13_events.html

inst/doc/v07_iov.R inst/doc/v09_dose_adaptation.R

inst/doc/v17_run_simulation_in_parallel.html

inst/doc/v03_covariates.html

inst/doc/v15_pkpd_model_library.Rmd

inst/doc/v14_complex_pkpd_models.html

inst/doc/v07_iov.Rmd inst/doc/v10_replicate_study.R inst/doc/v12_time_varying_covariates.R

inst/doc/v10_replicate_study.html

inst/doc/campsis.Rmd inst/doc/v11_scenarios.R inst/doc/v11_scenarios.Rmd inst/doc/v08_initial_conditions.R

inst/doc/v06_infusions.html

inst/doc/v11_scenarios.html

inst/doc/v13_events.Rmd

inst/doc/v08_initial_conditions.html

inst/doc/v08_initial_conditions.Rmd inst/doc/v02_uncertainties.R inst/doc/v17_run_simulation_in_parallel.R inst/doc/v16_progress_bar.Rmd inst/doc/v10_replicate_study.Rmd

inst/doc/v12_time_varying_covariates.html

inst/doc/campsis.R

inst/doc/v02_uncertainties.html

inst/doc/v05_lag_time.Rmd inst/doc/v06_infusions.R inst/doc/v14_complex_pkpd_models.Rmd

inst/doc/v15_pkpd_model_library.html

inst/doc/v01_dataset.R inst/doc/v12_time_varying_covariates.Rmd inst/doc/v09_dose_adaptation.Rmd inst/doc/v06_infusions.Rmd inst/doc/v15_pkpd_model_library.R inst/doc/v03_covariates.Rmd

inst/doc/v01_dataset.html

inst/doc/v09_dose_adaptation.html

inst/doc/v16_progress_bar.html

inst/doc/campsis.html

inst/doc/v07_iov.html

inst/doc/v05_lag_time.html

inst/doc/v04_bioavailability.R inst/doc/v16_progress_bar.R inst/doc/v14_complex_pkpd_models.R inst/doc/v02_uncertainties.Rmd

inst/doc/v04_bioavailability.html

inst/doc/v13_events.R

inst/extdata/campsis.schema.json

inst/extdata/campsismod.schema.json

inst/extdata/campsis_scenarios.schema.json

inst/extdata/campsis_settings.schema.json

inst/extdata/no_sub_schemas/campsis_scenarios.schema.json

build/vignette.rds

tests/testthat/models/simple_tte_model/model.campsis

tests/testthat/models/simple_tte_model/omega.csv

tests/testthat/models/simple_tte_model/theta.csv

tests/testthat/models/simple_tte_model/sigma.csv

tests/testthat/models/weibull_model/model.campsis

tests/testthat/models/weibull_model/omega.csv

tests/testthat/models/weibull_model/theta.csv

tests/testthat/models/weibull_model/sigma.csv

tests/testthat/models/minimalist_model/model.campsis

tests/testthat/_snaps/default_plots/shadedplot-colour-scenario-mrgsolve.svg

tests/testthat/_snaps/default_plots/shadedplot-colour-arm-wt-strat-wt-mrgsolve.svg

tests/testthat/_snaps/default_plots/shadedplot-colour-arm-strat-wt-rxode2.svg

tests/testthat/_snaps/default_plots/scatterplot-no-colour-rxode2.svg

tests/testthat/_snaps/default_plots/scatterplot-colour-scenario-rxode2.svg

tests/testthat/_snaps/default_plots/spaghettiplot-colour-scenario-mrgsolve.svg

tests/testthat/_snaps/default_plots/spaghettiplot-colour-arm-strat-wt-rxode2.svg

tests/testthat/_snaps/default_plots/shadedplot-colour-scenario-rxode2.svg

tests/testthat/_snaps/default_plots/shadedplot-colour-arm-wt-strat-wt-rxode2.svg

tests/testthat/_snaps/default_plots/spaghettiplot-colour-scenario-rxode2.svg

tests/testthat/_snaps/default_plots/spaghettiplot-colour-arm-strat-wt-mrgsolve.svg

tests/testthat/_snaps/default_plots/scatterplot-colour-scenario-mrgsolve.svg

tests/testthat/_snaps/default_plots/scatterplot-no-colour-mrgsolve.svg

tests/testthat/_snaps/default_plots/shadedplot-colour-arm-strat-wt-mrgsolve.svg

tests/testthat/_snaps/simulate_replicates/vpc-specified-outfun-mrgsolve-b.svg

tests/testthat/_snaps/simulate_replicates/vpc-specified-outfun-rxode2-b.svg

tests/testthat/_snaps/simulate_replicates/vpc-specified-outfun-mrgsolve-a.svg

tests/testthat/_snaps/simulate_replicates/vpc-specified-outfun-rxode2-c.svg

tests/testthat/_snaps/simulate_replicates/vpc-specified-outfun-rxode2-a.svg

tests/testthat/_snaps/simulate_replicates/vpc-specified-outfun-mrgsolve-c.svg

tests/testthat/_snaps/vpc_plot/vpc-plot-pi-campsis-tbl-strata-arm-colour.svg

tests/testthat/_snaps/vpc_plot/vpc-plot-pi-campsis-tbl-no-strata.svg

tests/testthat/_snaps/vpc_plot/vpc-plot-pi-campsis-tbl-strata-arm-facet.svg

tests/testthat/json_examples/scenarios_example1a.json

tests/testthat/json_examples/settings_cts_example2.json

tests/testthat/json_examples/dataset_example1e.json

tests/testthat/json_examples/dataset_example1a.json

tests/testthat/json_examples/dataset_example1b.json

tests/testthat/json_examples/dataset_bootstrap_example1.json

tests/testthat/json_examples/settings_cts_example3.json

tests/testthat/json_examples/settings_cts_example1.json

tests/testthat/json_examples/dataset_dose_adaptation_example1.json

tests/testthat/json_examples/dataset_example1d.json

tests/testthat/json_examples/dataset_cyclic_schedule_example1.json

tests/testthat/json_examples/settings_example1a.json

tests/testthat/json_examples/dataset_example2.json

tests/testthat/json_examples/dataset_example3_covariates.json

tests/testthat/json_examples/dataset_example1c.json

tests/testthat/json_examples/dataset_cyclic_schedule_example2.json

tests/testthat/json_examples/dataset_bootstrap_example2.json

tests/testthat/json_examples/settings_example_replicates.json

tests/testthat/json_examples/settings_example_replicates_hardware.json

tests/testthat/json_examples/settings_example1b.json

tests/testthat/non_regression/3_boluses_iov_ka_1_cp.csv

tests/testthat/non_regression/dose_adaptation_by_bw_a_test.csv

tests/testthat/non_regression/weibull_model_conc.csv

tests/testthat/non_regression/event_in_multiple_arms_cp.csv

tests/testthat/non_regression/dose_adaptation_by_bw_infusion.csv

tests/testthat/non_regression/multiple_doses_repeat_option_cp.csv

tests/testthat/non_regression/3_boluses_iov_ka_2.csv

tests/testthat/non_regression/dose_adaptation_by_bw_cp.csv

tests/testthat/non_regression/event_daily_dose_cp.csv

tests/testthat/non_regression/objects_defined_in_different_order.csv

tests/testthat/non_regression/3_boluses_iiv_f1.csv

tests/testthat/non_regression/minimalist_model_a_central.csv

tests/testthat/non_regression/simple_bolus_bioavailability.csv

tests/testthat/non_regression/ds_export_parallel_disabled_wt_iov_covariate.csv

tests/testthat/non_regression/initial_conditions_cp.csv

tests/testthat/non_regression/bolus_2arms_bioavailability.csv

tests/testthat/non_regression/infusion_duration.csv

tests/testthat/non_regression/3_boluses_iiv_iov_alag1.csv

tests/testthat/non_regression/occ_as_time_varying_cov_cp.csv

tests/testthat/non_regression/wt_as_time_varying_cov_locf_cp.csv

tests/testthat/non_regression/bolus_fixed_lag_time_cp.csv

tests/testthat/non_regression/3_boluses_iiv_iov_f1.csv

tests/testthat/non_regression/bolus_2arms_cp_arm.csv

tests/testthat/non_regression/simple_bolus.csv

tests/testthat/non_regression/event_interruption_at_dose_iov_cp.csv

tests/testthat/non_regression/event_interruption_at_dose_cp.csv

tests/testthat/non_regression/bolus_fixed_lag_time_dataset.csv

tests/testthat/non_regression/dose_adaptation_by_bw.csv

tests/testthat/non_regression/wt_as_time_varying_cov_nocb_cp.csv

tests/testthat/non_regression/bolus_2arms_cp.csv

tests/testthat/non_regression/infusion_rate_lag_time1_dataset_cp.csv

tests/testthat/non_regression/layer_added_to_multiple_arm_dataset.csv

tests/testthat/non_regression/3_infusions_iiv_iov_d1_cp.csv

tests/testthat/non_regression/3_boluses_iov_cl_cp.csv

tests/testthat/non_regression/infusion_rate_lag_time2_dataset_cp.csv

tests/testthat/non_regression/vectorised_compartment_properties.csv

tests/testthat/non_regression/3_boluses_iov_ka_2_cp.csv

tests/testthat/non_regression/scenarios_few_changes_on_dataset_scenario_cp.csv

tests/testthat/non_regression/3_boluses_iiv_iov_alag1_cp.csv

tests/testthat/non_regression/ds_export_parallel_enabled_wt_iov_covariate.csv

tests/testthat/non_regression/full_uncertainty_y.csv

tests/testthat/non_regression/bolus_fixed_lag_time_model.csv

tests/testthat/non_regression/scenarios_few_changes_on_model_scenario_cp.csv

tests/testthat/non_regression/clear_central_event_cp.csv

tests/testthat/non_regression/replicates_in_parallel_conc.csv

tests/testthat/non_regression/infusion_rate_lag_time2_dataset.csv

tests/testthat/non_regression/3_boluses_iov_ka_1.csv

tests/testthat/non_regression/3_boluses_iiv_iov_f1_cp.csv

tests/testthat/non_regression/simple_bolus_bioavailability_cp.csv

tests/testthat/non_regression/dose_adaptation_by_bw_infusion_cp.csv

tests/testthat/non_regression/occ_as_time_varying_cov.csv

tests/testthat/non_regression/3_infusions_iiv_d1.csv

tests/testthat/non_regression/simple_tte_model_a_survival_trigger.csv

tests/testthat/non_regression/full_uncertainty_cp.csv

tests/testthat/non_regression/trim_covariate_my_cov.csv

tests/testthat/non_regression/infusion_rate_lag_time1_dataset.csv

tests/testthat/non_regression/advan1_trans1_conc.csv

tests/testthat/non_regression/dose_adaptation_ctrough_cp_dose.csv

tests/testthat/non_regression/bolus_infusion_same_cmt_cp.csv

tests/testthat/non_regression/infusion_duration_cp.csv

tests/testthat/non_regression/event_varying_bw_cp.csv

tests/testthat/non_regression/simple_bolus_cp.csv

tests/testthat/non_regression/3_infusions_iiv_iov_d1.csv

tests/testthat/non_regression/event_varying_bw_2arms_ind_cp.csv

tests/testthat/non_regression/3_boluses_iiv_alag1.csv

tests/testthat/non_regression/3_bolus_iov_on_f1_cp.csv

tests/testthat/non_regression/wt_as_time_varying_cov.csv

tests/testthat/non_regression/bolus_infusion_same_cmt.csv

tests/testthat/non_regression/bolus_2arms.csv

vignettes/v17_run_simulation_in_parallel.Rmd vignettes/v04_bioavailability.Rmd vignettes/v01_dataset.Rmd vignettes/v15_pkpd_model_library.Rmd vignettes/v07_iov.Rmd vignettes/campsis.Rmd vignettes/v11_scenarios.Rmd vignettes/v13_events.Rmd vignettes/v08_initial_conditions.Rmd vignettes/v16_progress_bar.Rmd vignettes/v10_replicate_study.Rmd vignettes/v05_lag_time.Rmd vignettes/v14_complex_pkpd_models.Rmd vignettes/v12_time_varying_covariates.Rmd vignettes/v09_dose_adaptation.Rmd vignettes/v06_infusions.Rmd vignettes/v03_covariates.Rmd vignettes/v02_uncertainties.Rmd

vignettes/resources/readme_plot.png

vignettes/resources/Targets_Squeletton/_targets.R vignettes/resources/Targets_Squeletton/R/my_script.R vignettes/resources/Targets_Squeletton_Parallel/_targets.R vignettes/resources/Targets_Squeletton_Parallel/R/my_script.R

data/nhanes.rda

man/figures/logo.png

man/figures/readme_plot-1.png

campsis documentation built on Aug. 5, 2026, 9:07 a.m.

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campsis
Generic PK/PD Simulation Platform Campsis

Files in campsis
Generic PK/PD Simulation Platform Campsis

R Package Documentation

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campsis Generic PK/PD Simulation Platform Campsis

Files in campsis Generic PK/PD Simulation Platform Campsis

R Package Documentation

Browse R Packages

We want your feedback!

campsis
Generic PK/PD Simulation Platform Campsis

Files in campsis
Generic PK/PD Simulation Platform Campsis