FitCentrality: Fit Centrality Model

In cassandRa: Finds Missing Links and Metric Confidence Intervals in Ecological Bipartite Networks

Fit Centrality Model

Description

Repeatedly fits a centrality model to a binary interaction network to return a probability matrix

Usage

FitCentrality(
  list,
  N_runs = 10,
  maxit = 10000,
  method = "Nelder-Mead",
  ExtraSettings = NULL
)

Arguments

list	Network List
N_runs	Number of start points to try. The best (maximum likelihood) half will be used to construct the probability matrix
maxit	Default = 10'000
method	Passed to optim, default = 'Nelder-Mead'
ExtraSettings	Other control settings to pass to optim()

Value

Network list with added 'C_par', best fitting parameters, C_ProbsMatrix, the probability matrix

cassandRa documentation built on June 22, 2024, 10:21 a.m.