inst/roxygen-examples/tfci-example.R

In causalDisco: Tools for Causal Discovery on Observational Data

data(tpc_example)

kn <- knowledge(
  tpc_example,
  tier(
    child ~ tidyselect::starts_with("child"),
    youth ~ tidyselect::starts_with("youth"),
    oldage ~ tidyselect::starts_with("oldage")
  )
)

# Recommended path using disco()
my_tfci <- tfci(engine = "causalDisco", test = "fisher_z", alpha = 0.05)

disco(tpc_example, my_tfci, knowledge = kn)

# or using my_tfci directly
my_tfci <- my_tfci |> set_knowledge(kn)
my_tfci(tpc_example)

# Also possible: using tfci_run()
tfci_run(tpc_example, test = cor_test, knowledge = kn)