inst/roxygen-examples/tpc-example.R

In causalDisco: Tools for Causal Discovery on Observational Data

# Load data
data(tpc_example)

# Build knowledge
kn <- knowledge(
  tpc_example,
  tier(
    child ~ tidyselect::starts_with("child"),
    youth ~ tidyselect::starts_with("youth"),
    old ~ tidyselect::starts_with("old")
  )
)

# Recommended route using disco
my_tpc <- tpc(engine = "causalDisco", test = "fisher_z", alpha = 0.05)

disco(tpc_example, my_tpc, knowledge = kn)

# or using my_tpc directly

my_tpc <- my_tpc |> set_knowledge(kn)
my_tpc(tpc_example)

# Using tpc_run() directly

tpc_run(tpc_example, knowledge = kn, alpha = 0.01)