cgdsr: R-Based API for Accessing the MSKCC Cancer Genomics Data Server (CGDS)

Provides a basic set of R functions for querying the Cancer Genomics Data Server (CGDS), hosted by the Computational Biology Center at Memorial-Sloan-Kettering Cancer Center (MSKCC).

AuthorAnders Jacobsen <jacobsen@cbio.mskcc.org>
Date of publication2015-08-27 08:38:53
MaintainerAugustin Luna <lunaa@cbio.mskcc.org>
LicenseLGPL-3
Version1.2.5
https://github.com/cBioPortal/cgdsr

View on CRAN

Files in this package

cgdsr
cgdsr/inst
cgdsr/inst/tests
cgdsr/inst/tests/test_cgdsr.R
cgdsr/inst/doc
cgdsr/inst/doc/cgdsr.Rnw
cgdsr/inst/doc/cgdsr.R
cgdsr/inst/doc/cgdsr.pdf
cgdsr/tests
cgdsr/tests/runTests.R
cgdsr/NAMESPACE
cgdsr/R
cgdsr/R/cgdsr.R
cgdsr/vignettes
cgdsr/vignettes/cgdsr.Rnw
cgdsr/MD5
cgdsr/build
cgdsr/build/vignette.rds
cgdsr/DESCRIPTION
cgdsr/man
cgdsr/man/cgdsr-setVerbose.Rd cgdsr/man/cgdsr-getCancerStudies.Rd cgdsr/man/cgdsr-test.Rd cgdsr/man/cgdsr-getClinicalData.Rd cgdsr/man/cgdsr-package.Rd cgdsr/man/cgdsr-getProfileData.Rd cgdsr/man/cgdsr-processURL.Rd cgdsr/man/cgdsr-getCaseLists.Rd cgdsr/man/cgdsr-getMutationData.Rd cgdsr/man/cgdsr-setPlotErrorMsg.Rd cgdsr/man/cgdsr-CGDS.Rd cgdsr/man/cgdsr-plot.Rd cgdsr/man/cgdsr-getGeneticProfiles.Rd

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