cgdsr-test: Simple test suite for CGDS object.

In cgdsr: R-Based API for Accessing the MSKCC Cancer Genomics Data Server (CGDS)

Description

Queries the CGDS API and returns results of the tests.

Usage

## S3 method for class 'CGDS'
test(x, ...)

Arguments

x	A CGDS object.
...	Not used.

Details

A set of simple tests are evaluated. The format of the returned output from the following queries are tested: "getCancerStudies()", "getCaselists()", and "getGeneticProfiles()"

Value

Test results in text format.

Author(s)

<[e-mail]>

References

cBio Cancer Genomics Portal: http://www.cbioportal.org/

See Also

cgdsr,CGDS

Examples

# Create CGDS object
mycgds = CGDS("http://www.cbioportal.org/")

# Run tests
test(mycgds)

cgdsr documentation built on June 27, 2019, 5:07 p.m.