API for cinaR
A Computational Pipeline for Bulk 'ATAC-Seq' Profiles
| Global functions | |
|---|---|
| .onAttach | Source code |
| .parse_peak_bed | Source code |
| .prep_sc_one | Source code |
| .pseudobulk_counts | Source code |
| GSEA | Man page Source code |
| HPEA | Man page Source code |
| annotatePeaks | Man page Source code |
| bed | Man page |
| check_and_install_bioc_dependencies | Source code |
| cinaR | Man page Source code |
| color_values | Man page |
| differentialAnalyses | Man page Source code |
| dot_plot | Man page Source code |
| filterConsensus | Man page Source code |
| grch37 | Man page |
| grch38 | Man page |
| grcm38 | Man page |
| heatmap_differential | Man page Source code |
| heatmap_var_peaks | Man page Source code |
| normalizeConsensus | Man page Source code |
| pca_plot | Man page Source code |
| prep_scATAC_cinaR | Man page Source code |
| prep_scATAC_seurat | Man page Source code |
| run_enrichment | Man page |
| scale_rows | Man page |
| show_comparisons | Man page |
| verboseFn | Man page Source code |
| vp2008 | Man page |
