Description Usage Arguments Author(s) References See Also Examples
batch version for sta.paircomparison() function
1 | batch.paircomp(coexistlist, parnum, parameters)
|
coexistlist |
list of data generated by batch.coexistence() function |
parnum |
number of parameters you want to choose and compare pairwisely in the model, should be less than the total number of parameters i.e.,, for two species model<=7. |
parameters |
a parameter sampling point vector,for example parameters=c(.2,.5,.9), indicating three sampling points in a single parameter. The function will thus compare the coexistence patch numbers under the cases when each of the pairwise parameters (for example, growth rate and the competition ability of a species)=0.2,0.5 and 0.9 respectively. |
Youhua Chen <yhchen@zoology.ubc.ca>
Chen YH (2012) coexist: an R package for performing species coexistence modeling and analysis under asymmetric dispersal and fluctuating source-sink dynamics. http://code.google.com/p/coexist.
batch.coexistence
,
sta.paircomparison
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 | ##---- Should be DIRECTLY executable !! ----
##-- ==> Define data, use random,
##-- or do help(data=index) for the standard data sets.
## The function is currently defined as
function (coexistlist, parnum = parnum, parameters = parspace)
{
scenarionum <- length(coexistlist)
pairlist <- list()
length(pairlist) <- scenarionum
for (i in 1:scenarionum) {
pairlist[[i]] <- sta.paircomparison(coexistlist[[i]],
parnum = parnum, parameters = parameters)
}
return(pairlist)
}
|
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