tester_marg: run proportional test directly on marginal test stats from...
In colocPropTest: Proportional Testing for Colocalisation Analysis
tester_marg R Documentation
run proportional test directly on marginal test stats from coloc datasets
Description
run proportional test directly on marginal test stats from coloc datasets
Usage
tester_marg(j, S1, S2, LD1, LD2 = LD1)
Arguments
j
indices of thw two snps
S1
coloc dataset 1
S2
coloc dataset 2
LD1
LD matrix for dataset 1 - rownames, colnames capture the snps and S1$snp[j] must
be represented
LD2
LD matrix for dataset 2 - rownames, colnames capture the snps and S2$snp[j] must
be represented. if not supplied, defaults to LD1
Value
result from estprop
colocPropTest documentation built on June 24, 2024, 9:08 a.m.
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| tester_marg | R Documentation |
run proportional test directly on marginal test stats from coloc datasets
Description
run proportional test directly on marginal test stats from coloc datasets
Usage
tester_marg(j, S1, S2, LD1, LD2 = LD1)
Arguments
j |
indices of thw two snps |
S1 |
coloc dataset 1 |
S2 |
coloc dataset 2 |
LD1 |
LD matrix for dataset 1 - rownames, colnames capture the snps and S1$snp[j] must be represented |
LD2 |
LD matrix for dataset 2 - rownames, colnames capture the snps and S2$snp[j] must be represented. if not supplied, defaults to LD1 |
Value
result from estprop
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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