compareGroups: Descriptive Analysis by Groups

Create data summaries for quality control, extensive reports for exploring data, as well aspublication-ready univariate or bivariate tablesin several formats (plain text, HTML,LaTeX, PDF, Word or Excel. Create figuresto quickly visualise the distribution of your data (boxplots, barplots, normality-plots, etc.). Display statistics(mean, median, frequencies, incidences, etc.). Perform the appropriate tests(t-test, Analysis of variance, Kruskal-Wallis, Fisher, log-rank, ...) depending on the nature of the described variable (normal, non-normal or qualitative). Summarize genetic data(Single Nucleotide Polymorphisms) data displaying Allele Frequencies and performing Hardy-Weinberg Equilibrium tests among other typical statistics and tests for these kind of data.

AuthorIsaac Subirana, Joan Vila, Hctor Sanz, Gavin Lucas, Judith Peafiel and David Gimnez
Date of publication2016-12-07 18:05:16
MaintainerIsaac Subirana <isubirana@imim.es>
LicenseGPL (>= 2)
Version3.2.2
http://www.comparegroups.eu

View on CRAN

Files in this package

compareGroups
compareGroups/inst
compareGroups/inst/exdata
compareGroups/inst/exdata/regicor.dat
compareGroups/inst/exdata/regicor.sav
compareGroups/inst/exdata/predimed.csv
compareGroups/inst/exdata/predimed.dat
compareGroups/inst/exdata/regicor.csv
compareGroups/inst/exdata/predimed.xlsx
compareGroups/inst/exdata/predimed.xls
compareGroups/inst/exdata/predimed.sav
compareGroups/inst/app
compareGroups/inst/app/ui.R
compareGroups/inst/app/server.R
compareGroups/inst/app/www
compareGroups/inst/app/www/bootstrap.journal.min.css
compareGroups/inst/app/www/examples
compareGroups/inst/app/www/examples/example3.png
compareGroups/inst/app/www/examples/example4.png
compareGroups/inst/app/www/examples/example5.png
compareGroups/inst/app/www/examples/example6.png
compareGroups/inst/app/www/examples/example7.png
compareGroups/inst/app/www/examples/example1.png
compareGroups/inst/app/www/examples/example2.png
compareGroups/inst/app/www/images
compareGroups/inst/app/www/images/loading.gif
compareGroups/inst/app/www/bootstrap.slate.min.css
compareGroups/inst/app/www/bootstrap.spacelab.min.css
compareGroups/inst/app/www/bootstrap.cerulean.min.css
compareGroups/inst/app/www/bootstrap.paper.min.css
compareGroups/inst/app/www/bootstrap.cosmo.min.css
compareGroups/inst/app/www/bootstrap.yeti.min.css
compareGroups/inst/app/www/bootstrap.united.min.css
compareGroups/inst/app/www/bootstrap.darkly.min.css
compareGroups/inst/app/www/bootstrap.simplex.min.css
compareGroups/inst/app/www/bootstrap.lumen.min.css
compareGroups/inst/app/www/bootstrap.superhero.min.css
compareGroups/inst/app/www/bootstrap.sandstone.min.css
compareGroups/inst/app/www/bootstrap.cyborg.min.css
compareGroups/inst/app/www/bootstrap.readable.min.css
compareGroups/inst/app/www/bootstrap.flatly.min.css
compareGroups/inst/app/www/tablePDF6755.pdf
compareGroups/inst/app/spss_varlist.R
compareGroups/inst/app/help.html
compareGroups/inst/app/global.R
compareGroups/inst/CITATION
compareGroups/inst/doc
compareGroups/inst/doc/compareGroups_vignette.R
compareGroups/inst/doc/compareGroups_vignette.Rmd
compareGroups/inst/doc/changelog
compareGroups/inst/doc/compareGroups_vignette.html
compareGroups/NAMESPACE
compareGroups/data
compareGroups/data/predimed.rda
compareGroups/data/regicor.rda
compareGroups/R
compareGroups/R/createTable.R compareGroups/R/z[.compareGroups.R compareGroups/R/plot.createTable.R compareGroups/R/z[.createTable.R compareGroups/R/export2html.R compareGroups/R/print.createTable.R compareGroups/R/getResults.R compareGroups/R/KMg.plot.R compareGroups/R/cGroupsGUI.R compareGroups/R/compare.i.R compareGroups/R/update.compareGroups.R compareGroups/R/plot.compareGroups.R compareGroups/R/compareGroups.R compareGroups/R/cbind.createTable.R compareGroups/R/radiograph.R compareGroups/R/logrank.pval.R compareGroups/R/report.R compareGroups/R/snpQC.R compareGroups/R/cGroupsWUI.R compareGroups/R/combn2.R compareGroups/R/table.i.R compareGroups/R/flip.R compareGroups/R/print.summary.compareGroups.R compareGroups/R/formula.compareGroups.R compareGroups/R/export2xls.R compareGroups/R/varinfo.createTable.R compareGroups/R/bar2.plot.R compareGroups/R/printTable.R compareGroups/R/varinfo.compareGroups.R compareGroups/R/chisq.test2.R compareGroups/R/export2word.R compareGroups/R/compareSNPs.R compareGroups/R/export2csv.R compareGroups/R/z[.rbind.createTable.R compareGroups/R/rbind.createTable.R compareGroups/R/export2latex.R compareGroups/R/descripSurv.R compareGroups/R/z[.cbind.createTable.R compareGroups/R/print.cbind.createTable.R compareGroups/R/missingTable.R
compareGroups/R/print.compareSNPs.r
compareGroups/R/bar.plot.R compareGroups/R/export2latex.createTable.R compareGroups/R/export2pdf.R compareGroups/R/signifdec.i.R compareGroups/R/simplify.formula.R compareGroups/R/norm.plot.R compareGroups/R/summary.compareGroups.R compareGroups/R/summ.i.R compareGroups/R/summary.createTable.R
compareGroups/R/print.summary.createTable.r
compareGroups/R/format2.R compareGroups/R/rbind.compareGroups.R compareGroups/R/compareGroups.formula.R compareGroups/R/signifdec.R compareGroups/R/box.plot.R compareGroups/R/KM.plot.R compareGroups/R/Cox.plot.R compareGroups/R/export2md.R compareGroups/R/export2latex.cbind.createTable.R compareGroups/R/compareGroups.default.R compareGroups/R/print.compareGroups.R compareGroups/R/compareGroups-internal.R compareGroups/R/z[.rbind.compareGroups.R
compareGroups/R/prepare.r
compareGroups/R/varinfo.R compareGroups/R/update.formula2.R compareGroups/R/descrip.R
compareGroups/vignettes
compareGroups/vignettes/figures
compareGroups/vignettes/figures/classes.tex
compareGroups/vignettes/figures/WUI
compareGroups/vignettes/figures/WUI/step3.png
compareGroups/vignettes/figures/WUI/step6b2.png
compareGroups/vignettes/figures/WUI/step5b.png
compareGroups/vignettes/figures/WUI/step6a.png
compareGroups/vignettes/figures/WUI/step1.png
compareGroups/vignettes/figures/WUI/step6d.png
compareGroups/vignettes/figures/WUI/step2.png
compareGroups/vignettes/figures/WUI/step5c1.png
compareGroups/vignettes/figures/WUI/step5d.png
compareGroups/vignettes/figures/WUI/step7a.png
compareGroups/vignettes/figures/WUI/step7.png
compareGroups/vignettes/figures/WUI/step5a.png
compareGroups/vignettes/figures/WUI/step4.png
compareGroups/vignettes/figures/WUI/step7b.png
compareGroups/vignettes/figures/WUI/step6c.png
compareGroups/vignettes/figures/WUI/step6b3.png
compareGroups/vignettes/figures/WUI/step6b1.png
compareGroups/vignettes/figures/WUI/step5c2.png
compareGroups/vignettes/figures/WUI/step8.png
compareGroups/vignettes/figures/univar
compareGroups/vignettes/figures/univar/age.png
compareGroups/vignettes/figures/univar/sex.png
compareGroups/vignettes/figures/univar/tmain.png
compareGroups/vignettes/figures/bivarsurv
compareGroups/vignettes/figures/bivarsurv/age.png
compareGroups/vignettes/figures/bivarsurv/sex.png
compareGroups/vignettes/figures/classes.png
compareGroups/vignettes/figures/bivar
compareGroups/vignettes/figures/bivar/age.png
compareGroups/vignettes/figures/bivar/sex.png
compareGroups/vignettes/figures/bivar/tmain.png
compareGroups/vignettes/figures/classes.pdf
compareGroups/vignettes/figures/GUI
compareGroups/vignettes/figures/GUI/step1_load_data.JPG
compareGroups/vignettes/figures/GUI/or_rr.png
compareGroups/vignettes/figures/GUI/step2_select_row_variables.png
compareGroups/vignettes/figures/GUI/toevent.png
compareGroups/vignettes/figures/GUI/step5_select_method.png
compareGroups/vignettes/figures/GUI/step6_subsetting.png
compareGroups/vignettes/figures/GUI/step8_export_table.png
compareGroups/vignettes/figures/GUI/step3_select_group_variable.png
compareGroups/vignettes/figures/GUI/step7_report_options.png
compareGroups/vignettes/figures/GUI/step4_hide_categ.png
compareGroups/vignettes/figures/GUI/xxxx.png
compareGroups/vignettes/compareGroups_vignette.Rmd
compareGroups/vignettes/compareGroups_vignette.bib
compareGroups/MD5
compareGroups/build
compareGroups/build/vignette.rds
compareGroups/DESCRIPTION
compareGroups/man
compareGroups/man/compareGroups-package.Rd compareGroups/man/printTable.Rd compareGroups/man/regicor.Rd compareGroups/man/cGroupsGUI.Rd compareGroups/man/export2html.Rd compareGroups/man/varinfo.Rd compareGroups/man/compareGroups.Rd compareGroups/man/export2xls.Rd compareGroups/man/compareGroups-internal.Rd compareGroups/man/export2word.Rd compareGroups/man/export2md.Rd compareGroups/man/cGroupsWUI.Rd compareGroups/man/predimed.Rd compareGroups/man/radiograph.Rd compareGroups/man/export2csv.Rd compareGroups/man/missingTable.Rd compareGroups/man/export2latex.Rd compareGroups/man/compareSNPs.Rd compareGroups/man/report.Rd compareGroups/man/createTable.Rd compareGroups/man/getResults.Rd compareGroups/man/export2pdf.Rd

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