Files in compendiumdb
Tools for Retrieval and Storage of Functional Genomics Data
MD5
DESCRIPTION
NAMESPACE
INSTALL
inst/scripts/README
inst/scripts/R/gzipScript.R
inst/scripts/R/downloadSoftFile.R
inst/scripts/R/esetGeneration.R
inst/scripts/Perl/loadAllforGSEeset.pl
inst/scripts/Perl/deleteAllforGPL.pl
inst/scripts/Perl/fetchESET.pl
inst/scripts/Perl/getAllForGSE.pl
inst/scripts/Perl/loadGDS.pl
inst/scripts/Perl/deleteAllforGSE.pl
inst/scripts/Perl/loadGPL.pl
inst/scripts/Perl/parsingSoftFile_forESET.pl
inst/scripts/Perl/loadGSMeset.pl
inst/scripts/Perl/transpose.pl
inst/scripts/Perl/load_notGDS.pl
inst/scripts/Perl/expDesign.pl
inst/scripts/BigMac/COMPENDIUM/compendiumSUB.pm
inst/doc/index.html
inst/doc/compendiumdb.pdf
inst/extdata/compendiumOrganismTable.txt
inst/extdata/compendiumSchema.sql
inst/extdata/configuration.txt
R/patternCheck.R
R/downloadGEOdata.R
R/GSEinDB.R
R/GSMdescriptions.R
R/loadDataToCompendium.R
R/checkUpdates.R
R/connectDatabase.R
R/parseSampleAnnot.R
R/updatePhenoData.R
R/removeGSE.R
R/GDSforGSE.R
R/loadDatabaseSchema.R
R/tagExperiment.R
R/createESET.R
R/GSEforGPL.R
man/GSEinDB.Rd
man/removeGSE.Rd
man/loadDatabaseSchema.Rd
man/createESET.Rd
man/checkUpdates.Rd
man/connectDatabase.Rd
man/tagExperiment.Rd
man/downloadGEOdata.Rd
man/GSMdescriptions.Rd
man/GSEforGPL.Rd
man/loadDataToCompendium.Rd
man/updatePhenoData.Rd
man/GDSforGSE.Rd
man/compendiumdb-package.Rd
tests/testthat/test-connectDatabase.R
