calculate_curve: Calculate cumulative decay percent curve
In cuperdec: Cumulative Percent Decay Curve Generator

Description Usage Arguments Value Examples

Performs the initial decay curve based on percentage of 'target' isolation source along a rank of most to least abundant taxa for a given sample.

1	calculate_curve(taxa_table, database)

`taxa_table`	An OTU table loaded with `load_taxa_table`.
`database`	A database file loaded with `load_database`.

An object in the form of a tibble with taxa of each given sample ordered by rank and the proportion of taxa up to that rank deriving from your target source.

data(cuperdec_taxatable_ex)
data(cuperdec_database_ex)

taxa_table <- load_taxa_table(cuperdec_taxatable_ex)
iso_database <- load_database(cuperdec_database_ex, target = "oral")

calculate_curve(taxa_table, iso_database)