getBestAssociatedGeneSet: Get best associated functional gene sets for partitions of...
In decode: Differential Co-Expression and Differential Expression Analysis
Description
Usage
Arguments
Value
Description
Get best associated functional gene sets for partitions of gene i
Usage
1
2
getBestAssociatedGeneSet(pathway, all8Partitions, onePartition, MaxGene,
minSupport)
Arguments
pathway
All functional gene sets
all8Partitions
All eight possible partitions for gene i
onePartition
The partition to be associated with the functional gene set
MaxGene
Number of genes in expression data
minSupport
Minimum support for functional gene set
Value
The adjusted p-values for the best associated gene set of the input partition
decode documentation built on May 2, 2019, 11:28 a.m.
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Description Usage Arguments Value
Description
Get best associated functional gene sets for partitions of gene i
Usage
1 2 | getBestAssociatedGeneSet(pathway, all8Partitions, onePartition, MaxGene,
minSupport)
|
Arguments
pathway |
All functional gene sets |
all8Partitions |
All eight possible partitions for gene i |
onePartition |
The partition to be associated with the functional gene set |
MaxGene |
Number of genes in expression data |
minSupport |
Minimum support for functional gene set |
Value
The adjusted p-values for the best associated gene set of the input partition
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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