disparity | R Documentation |
An example of a dispRity
object.
one dispRity
object.
This matrix is based on the BeckLee
dataset and split into seven continuous subsets (chrono.subsets
).
It was bootstrapped 100 times (boot.matrix
) with four rarefaction levels.
Disparity was calculated as the median
of the centroids
(dispRity
).
BeckLee_disparity BeckLee
## Not run: ## Loading the data data(BeckLee_mat99) data(BeckLee_tree) data(BeckLee_ages) ## Creating the 7 subsets subsets <- chrono.subsets(BeckLee_mat99, BeckLee_tree, time = seq(from = 30, to = 90, by = 10), method = "continuous", model = "ACCTRAN", FADLAD = BeckLee_ages) ## Bootstrapping and rarefying bootstraps <- boot.matrix(subsets, bootstraps = 100, rarefaction = c(20, 15, 10, 5)) ## Calculating disparity disparity <- dispRity(bootstraps, metric = c(median, centroids)) ## End(Not run)
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