dmt: Dependency Modeling Toolkit

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Probabilistic dependency modeling toolkit.

Author
Leo Lahti and Olli-Pekka Huovilainen
Date of publication
2013-12-12 01:20:16
Maintainer
Leo Lahti <leo.lahti@iki.fi>
License
BSD_2_clause + file LICENSE
Version
0.8.20

View on CRAN

Man pages

centerData
Center data matrix.
compare.estimate.and.truth
Measuring model accuracy.
DependencyModel-class
Class "DependencyModel"
dependency.score
dependency.score
drCCAcombine
A function to combine several data sets
expdata
Example data for drCCA
fit.dependency.model
Fit dependency model between two data sets.
generate.toydata
Toy data generation
likelihood
Likelihood for the models.
modelData
An example data set
plotVar
Data-specific and shared variance for several...
regCCA
Generalized Canonical Correlation Analysis
sharedVar
Shared variation retained in the combined drCCA...
specificVar
Data-specific variation retained in the combined drCCA...
z.expectation
Expectation of the latent variable.

Files in this package

dmt
dmt/inst
dmt/inst/NEWS
dmt/inst/doc
dmt/inst/doc/dmt.R
dmt/inst/doc/dmt.Rnw
dmt/inst/doc/dmt.pdf
dmt/NAMESPACE
dmt/data
dmt/data/modelData.RData
dmt/data/expdata2.rda
dmt/data/expdata1.rda
dmt/R
dmt/R/drcca-functions.R
dmt/R/AllClasses.R
dmt/R/AllGenerics.R
dmt/R/update.W.R
dmt/R/show-methods.R
dmt/R/update.phi.R
dmt/R/fit.dependency.model.R
dmt/R/optimize.parameters.R
dmt/R/internals.R
dmt/R/utilities.R
dmt/R/get.W.R
dmt/R/dependency.score.R
dmt/R/set.M.R
dmt/R/toydata.R
dmt/R/DependencyModel-accessors.R
dmt/R/z.expectation.R
dmt/R/set.beta.R
dmt/R/firstlib.R
dmt/vignettes
dmt/vignettes/dmt.Rnw
dmt/vignettes/cca2.png
dmt/vignettes/cca2.eps
dmt/vignettes/dmt.bib
dmt/MD5
dmt/build
dmt/build/vignette.rds
dmt/DESCRIPTION
dmt/man
dmt/man/specificVar.Rd
dmt/man/regCCA.Rd
dmt/man/generate.toydata.Rd
dmt/man/fit.dependency.model.Rd
dmt/man/centerData.Rd
dmt/man/likelihood.Rd
dmt/man/compare.estimate.and.truth.Rd
dmt/man/expdata.Rd
dmt/man/modelData.Rd
dmt/man/sharedVar.Rd
dmt/man/DependencyModel-class.Rd
dmt/man/drCCAcombine.Rd
dmt/man/plotVar.Rd
dmt/man/dependency.score.Rd
dmt/man/z.expectation.Rd
dmt/LICENSE