modelData: An example data set

Description Usage Format Source Examples

Description

Preprocessed gene expression and gene copy number levels of 51 patients in chromosome 17 for 10 genes.

Usage

1
data(modelData)

Format

X

Gene expression levels in matrix form. Genes are in columns and samples in rows.

Y

Gene copy number levels in matrix form. Genes are in columns and samples in rows.

Source

Integrated gene copy number and expression microarray analysis of gastric cancer highlights potential target genes. Myllykangas et al., International Journal of Cancer, vol. 123, no. 4, pp. 817–25, 2008.

Examples

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data(modelData)

model <- fit.dependency.model(X, Y)
model

dmt documentation built on May 1, 2019, 8:12 p.m.