dna: Differential Network Analysis

Package for conducting differential network analysis from microarray data.

Install the latest version of this package by entering the following in R:
install.packages("dna")
AuthorRyan Gill, Somnath Datta, Susmita Datta
Date of publication2014-03-22 23:32:13
MaintainerRyan Gill <ryan.gill@louisville.edu>
LicenseGPL-2
Version1.1-1

View on CRAN

Functions

Files

inst
inst/doc
inst/doc/Introduction.Rnw
inst/doc/Introduction.R
inst/doc/Introduction.pdf
src
src/rrunif.c
src/Makevars
src/rpcnet.c
src/absDISTsinglegene.c
src/UnionIntersectionStat.c
src/rcor.c
src/sqrDISTsinglegene.c
src/rrrnet.c
src/tdcindPC.c
src/absDISTclassgenes.c
src/tdcindPLS.c
src/rplsnet.c
src/tdmsPC.c
src/tdcindRR.c
src/tdcclassPC.c
src/tdmsRR.c
src/rgmd.c
src/tdmsPLS.c
src/plslib.h
src/perm.c
src/tdcclassRR.c
src/tdcclassPLS.c
src/sqrDISTclassgenes.c
NAMESPACE
data
data/LeanMice.rda
data/HeavyMice.rda
R
R/test.modular.structure.R R/get.common.networks-methods.R R/RRnet.R R/onAttach.R R/AllClass.R R/test.individual.genes.R R/AllSummary.R R/cornet.R R/network.modules.R R/get.modules-methods.R R/get.network1-methods.R R/AllShow.R R/gennet.R R/PCnet.R R/get.network2-methods.R R/test.class.genes.R R/AllGeneric.R R/AllGetResults.R R/PLSnet.R
vignettes
vignettes/Introduction.Rnw
MD5
build
build/vignette.rds
DESCRIPTION
man
man/cornet.rd
man/get.common.networks-methods.rd
man/gennet.rd
man/resultsIndTest-class.rd
man/get.modules-methods.rd
man/network.modules.rd
man/test.individual.genes.rd
man/pairOfNetworks-class.rd
man/test.class.genes.rd
man/summary-methods.rd
man/RRnet.rd
man/HeavyMice.rd
man/modules-class.rd
man/resultsClassTest-class.rd
man/LeanMice.rd
man/PCnet.rd
man/PLSnet.rd
man/resultsModTest-class.rd
man/test.modular.structure.rd
man/get.results-methods.rd
man/get.network1-methods.rd
man/get.network2-methods.rd

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

Please suggest features or report bugs with the GitHub issue tracker.

All documentation is copyright its authors; we didn't write any of that.