dynsurv: Dynamic Models for Survival Data

Functions to fit time-varying coefficient models for interval censored and right censored survival data. Three major approaches are implemented: 1) Bayesian Cox model with time-independent, time-varying or dynamic coefficients for right censored and interval censored data; 2) Spline based time-varying coefficient Cox model for right censored data; 3) Transformation model with time-varying coefficients for right censored data using estimating equations.

Author
Wenjie Wang [cre, aut], Ming-Hui Chen [aut], Xiaojing Wang [aut], Jun Yan [aut]
Date of publication
2016-10-15 18:51:58
Maintainer
Wenjie Wang <wenjie.2.wang@uconn.edu>
License
GPL (>= 3)
Version
0.3-3
URLs

View on CRAN

Man pages

bayesCox
Fit Bayesian Cox Model for Interval Censored Survival Data
bcos
Breast Cancer Data
coef.bayesCox
Extract Coefficients from Bayesian Cox Model
coef.splineCox
Extract Coefficients from Spline Base Cox Model
coef.tvTran
Extract Coefficients from Time-varying Transformation Model
dynsurv
dynsurv: Time-varying coefficient models for interval...
jump
Generic function for jump information
nu
Generic function for the latent variance
plotCoef
Plot Coefficient Function
plotJump
Plot Jump Information in Bayesian Dynamic Model
plotNu
Plot Latent Variance in Bayesian Cox Model
plotSurv
Plot Survival Curves (or Cumulative Hazard Function) and...
splineCox
Fit Spline Based Cox Model for Right Censored Survival Data
survCurve
Estimated Survival Function or Cumulative Hazard Function
survDiff
Estimated Difference Between Survival or Cumulative Hazard...
tooth
Tooth Data
tvTran
Fit Time-varying Transformation Model for Right Censored...

Files in this package

dynsurv
dynsurv/inst
dynsurv/inst/CITATION
dynsurv/src
dynsurv/src/ublas_ext.h
dynsurv/src/IntRegPrior.h
dynsurv/src/IntRegModel.h
dynsurv/src/Makevars
dynsurv/src/TimeIndepModel.h
dynsurv/src/TimeVaryingGORHModel.h
dynsurv/src/arms.h
dynsurv/src/IntRegData.h
dynsurv/src/IntRegPar.cpp
dynsurv/src/DynamicCoxModel.h
dynsurv/src/ublas.h
dynsurv/src/TimeVaryingCoxModel.h
dynsurv/src/IntRegPar.h
dynsurv/src/TimeIndepCoxModel.h
dynsurv/src/DynamicCoxModel_v2.h
dynsurv/src/GORHModel.h
dynsurv/src/GibbsSampler.h
dynsurv/src/bayesCox.cpp
dynsurv/src/CoxModel.h
dynsurv/src/DynamicModel.h
dynsurv/src/TimeVaryingModel.h
dynsurv/src/DynamicGORHModel.h
dynsurv/src/rng.h
dynsurv/src/arms.c
dynsurv/src/TimeIndepGORHModel.h
dynsurv/NAMESPACE
dynsurv/data
dynsurv/data/tooth.RData
dynsurv/data/bcos.RData
dynsurv/R
dynsurv/R/tvTran.R
dynsurv/R/bayesCox.R
dynsurv/R/plot.R
dynsurv/R/dynsurv-package.R
dynsurv/R/data.R
dynsurv/R/coef.R
dynsurv/R/jump.R
dynsurv/R/print.R
dynsurv/R/splineCox.R
dynsurv/R/survCurv.R
dynsurv/MD5
dynsurv/DESCRIPTION
dynsurv/ChangeLog
dynsurv/man
dynsurv/man/bcos.Rd
dynsurv/man/dynsurv.Rd
dynsurv/man/nu.Rd
dynsurv/man/bayesCox.Rd
dynsurv/man/plotNu.Rd
dynsurv/man/coef.bayesCox.Rd
dynsurv/man/coef.tvTran.Rd
dynsurv/man/tvTran.Rd
dynsurv/man/jump.Rd
dynsurv/man/plotSurv.Rd
dynsurv/man/tooth.Rd
dynsurv/man/coef.splineCox.Rd
dynsurv/man/plotCoef.Rd
dynsurv/man/plotJump.Rd
dynsurv/man/survDiff.Rd
dynsurv/man/survCurve.Rd
dynsurv/man/splineCox.Rd