Quantitative Exploration of Elastic Net Families for Generalized Linear Models

breastCancerSurv | gene signature for breast cancer survival |

eNetXplorer | generates family of elastic net models for different alphas |

eNetXplorer-internal | Internal eNetXplorer functions |

eNetXplorer-package | explores elastic net families for generalized linear models |

export | generates plain text files from eNetXplorer object |

H1N1_Flow | longitudinal cell population frequencies and titer response... |

Leukemia_miR | microRNA expression of acute leukemia phenotypes |

Leuk_miR_filt | microRNA expression of acute leukemia phenotypes (filtered... |

Leuk_miR_full | microRNA expression of acute leukemia phenotypes (full... |

mergeObj | merges eNetXplorer objects with different alphas |

plotContingency | generates plot of response vs out-of-bag predictions across... |

plot.eNetXplorer | generates plots from eNetXplorer object |

plotFeatureCaterpillar | generates caterpillar plot of feature statistics |

plotFeatureHeatmap | generates heatmap plot of feature statistics |

plotKaplanMeier | generates Kaplan-Meier plot of survival probability as a... |

plotLambdaVsQF | generates plot of quality function across 'lambda' |

plotMeasuredVsOOB | generates plot of response vs out-of-bag predictions across... |

plotSummary | generates summary plots of model performance across alpha |

plotSurvROC | generates time-dependent ROC plots from Cox predicted risks |

QuickStartEx | synthetic dataset |

summary.eNetXplorer | generates list of model statistics |

summaryPDF | generates PDF report with summary of main results |

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