Description Usage Arguments Value See Also Examples
View source: R/random_forest.R
This function wraps the easyml core framework, allowing a user to easily run the easyml methodology for a random forest model.
1 2 3 4 5 6 7 8 | easy_random_forest(.data, dependent_variable, family = "gaussian",
resample = NULL, preprocess = preprocess_identity, measure = NULL,
exclude_variables = NULL, categorical_variables = NULL,
train_size = 0.667, foldid = NULL, n_samples = 1000,
n_divisions = 1000, n_iterations = 10, random_state = NULL,
progress_bar = TRUE, n_core = 1, coefficients = FALSE,
variable_importances = TRUE, predictions = TRUE,
model_performance = TRUE, model_args = list())
|
.data |
A data.frame; the data to be analyzed. |
dependent_variable |
A character vector of length one; the dependent variable for this analysis. |
family |
A character vector of length one; the type of regression to run on the data. Choices are one of c("gaussian", "binomial"). Defaults to "gaussian". |
resample |
A function; the function for resampling the data. Defaults to NULL. |
preprocess |
A function; the function for preprocessing the data. Defaults to NULL. |
measure |
A function; the function for measuring the results. Defaults to NULL. |
exclude_variables |
A character vector; the variables from the data set to exclude. Defaults to NULL. |
categorical_variables |
A character vector; the variables that are categorical. Defaults to NULL. |
train_size |
A numeric vector of length one; specifies what proportion of the data should be used for the training data set. Defaults to 0.667. |
foldid |
A vector with length equal to |
n_samples |
An integer vector of length one; specifies the number of times the coefficients and predictions should be generated. Defaults to 1000. |
n_divisions |
An integer vector of length one; specifies the number of times the data should be divided when replicating the measures of model performance. Defaults to 1000. |
n_iterations |
An integer vector of length one; during each division, specifies the number of times the predictions should be generated. Defaults to 10. |
random_state |
An integer vector of length one; specifies the seed to be used for the analysis. Defaults to NULL. |
progress_bar |
A logical vector of length one; specifies whether to display a progress bar during calculations. Defaults to TRUE. |
n_core |
An integer vector of length one; specifies the number of cores to use for this analysis. Currently only works on Mac OSx and Unix/Linux systems. Defaults to 1. |
coefficients |
A logical vector of length one; whether or not to generate coefficients for this analysis. |
variable_importances |
A logical vector of length one; whether or not to generate variable importances for this analysis. |
predictions |
A logical vector of length one; whether or not to generate predictions for this analysis. |
model_performance |
A logical vector of length one; whether or not to generate measures of model performance for this analysis. |
model_args |
A list; the arguments to be passed to the algorithm specified. |
A list of class easy_random_forest
.
Other recipes: easy_analysis
,
easy_avNNet
,
easy_deep_neural_network
,
easy_glinternet
, easy_glmnet
,
easy_neural_network
,
easy_support_vector_machine
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 | ## Not run:
library(easyml) # https://github.com/CCS-Lab/easyml
# Gaussian
data("prostate", package = "easyml")
results <- easy_random_forest(prostate, "lpsa",
n_samples = 10L,
n_divisions = 10,
n_iterations = 2,
random_state = 12345, n_core = 1)
# Binomial
data("cocaine_dependence", package = "easyml")
results <- easy_random_forest(cocaine_dependence, "diagnosis",
family = "binomial",
exclude_variables = c("subject"),
categorical_variables = c("male"),
n_samples = 10,
n_divisions = 10,
n_iterations = 2,
random_state = 12345, n_core = 1)
## End(Not run)
|
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